- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bosTau4-178 | Bos taurus | bta-miR-450 | 22/22 | chrUn.004.53 | - | 17-38 | 440492-440578 | 0.998855 | Paralog | 8/17 | 2/34 |
2 | bosTau4-178 | Bos taurus | rno-miR-450a | 21/22 | chrUn.004.53 | - | 13-33 | 440495-440575 | 0.997873 | Paralog | 8/17 | 2/34 |
3 | bosTau4-178 | Bos taurus | cfa-miR-450a | 22/22 | chrUn.004.53 | - | 16-37 | 440492-440578 | 0.998855 | Paralog | 8/17 | 2/34 |
4 | bta-mir-450 | Bos taurus | bta-miR-450 | 22/22 | chrUn.004.53 | - | 22-43 | N/A | - | miRBase_13_0 | 8/17 | 2/34 |
5 | braFlo1-69 | Branchiostoma floridae | mmu-miR-450a-3p | 20/22 | chrUn | + | 14-35 | 721079297-721079378 | 0.937541 | Ortholog | 8/17 | 1/34 |
6 | calJac1-375 | Callithrix jacchus | rno-miR-450a | 20/22 | Contig3137 | + | 13-33 | 301541-301621 | 0.99994 | Ortholog | 8/17 | 2/34 |
7 | calJac1-375 | Callithrix jacchus | cfa-miR-450a | 21/22 | Contig3137 | + | 13-34 | 301541-301621 | 0.999961 | Ortholog | 8/17 | 2/34 |
8 | calJac1-375 | Callithrix jacchus | hsa-miR-450a | 21/22 | Contig3137 | + | 14-35 | 301541-301621 | 0.999961 | Ortholog | 8/17 | 2/34 |
9 | calJac1-376 | Callithrix jacchus | rno-miR-450a | 21/22 | Contig3137 | + | 13-33 | 301710-301790 | 0.999124 | Ortholog | 8/17 | 2/34 |
10 | calJac1-376 | Callithrix jacchus | hsa-miR-450a | 22/22 | Contig3137 | + | 14-35 | 301710-301790 | 0.999477 | Ortholog | 8/17 | 2/34 |
11 | calJac1-376 | Callithrix jacchus | cfa-miR-450a | 22/22 | Contig3137 | + | 13-34 | 301710-301790 | 0.999477 | Ortholog | 8/17 | 2/34 |
12 | cfa-mir-450a | Canis familiaris | cfa-miR-450a | 22/22 | chrX | - | 17-38 | N/A | - | miRBase_13_0 | 8/17 | 2/34 |
13 | cfa-mir-450b | Canis familiaris | cfa-miR-450b | 21/21 | chrX | - | 1-21 | N/A | - | miRBase_13_0 | 8/17 | 2/34 |
14 | cavPor3-190 | Cavia porcellus | hsa-miR-450a | 22/22 | scaffold_128 | - | 17-38 | 2873088-2873174 | 0.999848 | Ortholog | 8/17 | 2/34 |
15 | cavPor3-190 | Cavia porcellus | rno-miR-450a | 21/22 | scaffold_128 | - | 13-33 | 2873091-2873171 | 0.999697 | Ortholog | 8/17 | 2/34 |
16 | cavPor3-190 | Cavia porcellus | cfa-miR-450a | 22/22 | scaffold_128 | - | 16-37 | 2873088-2873174 | 0.999848 | Ortholog | 8/17 | 2/34 |
17 | cavPor3-192 | Cavia porcellus | cfa-miR-450a | 22/22 | scaffold_128 | - | 16-37 | 2873257-2873343 | 0.999259 | Ortholog | 8/17 | 2/34 |
18 | cavPor3-192 | Cavia porcellus | rno-miR-450a | 21/22 | scaffold_128 | - | 14-34 | 2873259-2873341 | 0.998583 | Ortholog | 8/17 | 2/34 |
19 | cavPor3-192 | Cavia porcellus | hsa-miR-450a | 22/22 | scaffold_128 | - | 17-38 | 2873257-2873343 | 0.999259 | Ortholog | 8/17 | 2/34 |
20 | dasNov1-209 | Dasypus novemcinctus | hsa-miR-450a | 21/22 | scaffold_34664 | + | 15-36 | N/A | 0.996195 | Ortholog | 8/17 | 2/34 |
21 | dasNov1-209 | Dasypus novemcinctus | rno-miR-450a | 20/22 | scaffold_34664 | + | 14-34 | N/A | 0.993798 | Ortholog | 8/17 | 2/34 |
22 | dasNov1-209 | Dasypus novemcinctus | cfa-miR-450a | 21/22 | scaffold_34664 | + | 14-35 | N/A | 0.996195 | Ortholog | 8/17 | 2/34 |
23 | dasNov1-210 | Dasypus novemcinctus | cfa-miR-450b | 21/21 | scaffold_34664 | + | 14-34 | N/A | 0.995472 | Ortholog | 8/17 | 2/34 |
24 | dasNov1-210 | Dasypus novemcinctus | hsa-miR-450b-5p | 22/22 | scaffold_34664 | + | 14-35 | N/A | 0.996582 | Ortholog | 8/17 | 2/34 |
25 | equCab1-604 | Equus caballus | rno-miR-450a | 21/22 | chrUn | + | 13-33 | 30497908-30497988 | 0.999621 | Ortholog | 8/17 | 1/34 |
26 | equCab1-604 | Equus caballus | hsa-miR-450a | 21/22 | chrUn | + | 14-34 | 30497908-30497988 | 0.999818 | Ortholog | 8/17 | 1/34 |
27 | equCab1-604 | Equus caballus | cfa-miR-450a | 22/22 | chrUn | + | 13-34 | 30497908-30497988 | 0.999784 | Ortholog | 8/17 | 1/34 |
28 | felCat3-396 | Felis catus | hsa-miR-450a | 22/22 | scaffold_217254 | - | 17-38 | 53663-53749 | 0.99901 | Ortholog | 8/17 | 2/34 |
29 | felCat3-396 | Felis catus | rno-miR-450a | 21/22 | scaffold_217254 | - | 13-33 | 53666-53746 | 0.998152 | Ortholog | 8/17 | 2/34 |
30 | felCat3-396 | Felis catus | cfa-miR-450a | 22/22 | scaffold_217254 | - | 16-37 | 53663-53749 | 0.99901 | Ortholog | 8/17 | 2/34 |
31 | felCat3-398 | Felis catus | rno-miR-450a | 21/22 | scaffold_217254 | - | 13-33 | 53800-53880 | 0.998879 | Ortholog | 8/17 | 2/34 |
32 | felCat3-398 | Felis catus | cfa-miR-450a | 22/22 | scaffold_217254 | - | 16-37 | 53797-53883 | 0.999337 | Ortholog | 8/17 | 2/34 |
33 | felCat3-398 | Felis catus | hsa-miR-450a | 22/22 | scaffold_217254 | - | 17-38 | 53797-53883 | 0.999337 | Ortholog | 8/17 | 2/34 |
34 | hsa-mir-450a-1 | Homo sapiens | hsa-miR-450a | 22/22 | chrX | - | 18-39 | 133502037-133502127 | - | miRBase_13_0 | 8/17 | 3/34 |
35 | hsa-mir-450a-2 | Homo sapiens | hsa-miR-450a | 22/22 | chrX | - | 23-44 | 133502204-133502303 | - | miRBase_13_0 | 8/17 | 3/34 |
36 | hsa-mir-450b | Homo sapiens | hsa-miR-450b-3p | 22/22 | chrX | - | 48-69 | 133501881-133501958 | - | miRBase_13_0 | 8/17 | 3/34 |
37 | hsa-mir-450b | Homo sapiens | hsa-miR-450b-5p | 22/22 | chrX | - | 11-32 | 133501881-133501958 | - | miRBase_13_0 | 8/17 | 3/34 |
38 | loxAfr1-98 | Loxodonta africana | hsa-miR-450b-5p | 22/22 | scaffold_18374 | - | 31-52 | N/A | 0.903268 | Ortholog | 8/17 | 1/34 |
39 | loxAfr1-98 | Loxodonta africana | cfa-miR-450b | 21/21 | scaffold_18374 | - | 30-50 | N/A | 0.876025 | Ortholog | 8/17 | 1/34 |
40 | mml-mir-450a-1 | Macaca mulatta | mml-miR-450a | 22/22 | chrX | - | 18-39 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
41 | mml-mir-450a-2 | Macaca mulatta | mml-miR-450a | 22/22 | chrX | - | 23-44 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
42 | mml-mir-450b | Macaca mulatta | mml-miR-450b-3p | 22/22 | chrX | - | 48-69 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
43 | mml-mir-450b | Macaca mulatta | mml-miR-450b-5p | 22/22 | chrX | - | 11-32 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
44 | mmu-mir-450a-1 | Mus musculus | mmu-miR-450a-5p | 22/22 | chrX | - | 18-39 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
45 | mmu-mir-450a-2 | Mus musculus | mmu-miR-450a-3p | 22/22 | chrX | - | 43-64 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
46 | mmu-mir-450a-2 | Mus musculus | mmu-miR-450a-5p | 22/22 | chrX | - | 8-29 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
47 | mmu-mir-450b | Mus musculus | mmu-miR-450b-3p | 22/22 | chrX | - | 50-71 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
48 | mmu-mir-450b | Mus musculus | mmu-miR-450b-5p | 22/22 | chrX | - | 14-35 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
49 | oryCun1-274 | Oryctolagus cuniculus | cfa-miR-450b | 21/21 | scaffold_199169 | - | 14-34 | N/A | 0.993913 | Ortholog | 8/17 | 3/34 |
50 | oryCun1-274 | Oryctolagus cuniculus | hsa-miR-450b-5p | 22/22 | scaffold_199169 | - | 14-35 | N/A | 0.99537 | Ortholog | 8/17 | 3/34 |
51 | oryCun1-275 | Oryctolagus cuniculus | cfa-miR-450a | 22/22 | scaffold_199169 | - | 16-37 | N/A | 0.999219 | Ortholog | 8/17 | 3/34 |
52 | oryCun1-275 | Oryctolagus cuniculus | rno-miR-450a | 21/22 | scaffold_199169 | - | 13-33 | N/A | 0.998528 | Ortholog | 8/17 | 3/34 |
53 | oryCun1-275 | Oryctolagus cuniculus | mmu-miR-450b-3p | 22/22 | scaffold_199169 | - | 49-70 | N/A | 0.999678 | Ortholog | 8/17 | 3/34 |
54 | oryCun1-278 | Oryctolagus cuniculus | cfa-miR-450a | 22/22 | scaffold_199169 | - | 27-48 | N/A | 0.994129 | Ortholog | 8/17 | 3/34 |
55 | oryCun1-278 | Oryctolagus cuniculus | mmu-miR-450b-3p | 21/22 | scaffold_199169 | - | 49-70 | N/A | 0.999794 | Ortholog | 8/17 | 3/34 |
56 | oryCun1-278 | Oryctolagus cuniculus | rno-miR-450a | 21/22 | scaffold_199169 | - | 13-33 | N/A | 0.998991 | Ortholog | 8/17 | 3/34 |
57 | oryCun1-278 | Oryctolagus cuniculus | hsa-miR-450a | 22/22 | scaffold_199169 | - | 28-49 | N/A | 0.992134 | Ortholog | 8/17 | 3/34 |
58 | ptr-mir-450a-1 | Pan troglodytes | ptr-miR-450a | 22/22 | chrX | - | 18-39 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
59 | ptr-mir-450a-2 | Pan troglodytes | ptr-miR-450a | 22/22 | chrX | - | 23-44 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
60 | ptr-mir-450b | Pan troglodytes | ptr-miR-450b | 22/22 | chrX | - | 48-69 | N/A | - | miRBase_13_0 | 8/17 | 3/34 |
61 | ponAbe2-811 | Pongo abelii | hsa-miR-450a | 22/22 | chrX | - | 17-38 | 133999584-133999670 | 0.999782 | Ortholog | 8/17 | 1/34 |
62 | ponAbe2-811 | Pongo abelii | cfa-miR-450a | 22/22 | chrX | - | 16-37 | 133999584-133999670 | 0.999782 | Ortholog | 8/17 | 1/34 |
63 | ponAbe2-811 | Pongo abelii | rno-miR-450a | 21/22 | chrX | - | 13-33 | 133999587-133999667 | 0.999551 | Ortholog | 8/17 | 1/34 |
64 | rn4-364 | Rattus norvegicus | rno-miR-450a | 21/22 | chrX | - | 15-35 | 139995083-139995167 | 0.99986 | Paralog | 8/17 | 2/34 |
65 | rn4-364 | Rattus norvegicus | cfa-miR-450a | 22/22 | chrX | - | 17-38 | 139995082-139995169 | 0.999929 | Paralog | 8/17 | 2/34 |
66 | rn4-364 | Rattus norvegicus | hsa-miR-450a | 22/22 | chrX | - | 18-39 | 139995081-139995169 | 0.99993 | Paralog | 8/17 | 2/34 |
67 | rno-mir-450a | Rattus norvegicus | rno-miR-450a | 22/22 | chrX | - | 17-38 | N/A | - | miRBase_13_0 | 8/17 | 2/34 |
68 | ssc-mir-450 | Sus scrofa | ssc-miR-450 | 22/22 | chrX | - | 28-49 | N/A | - | miRBase_13_0 | 8/17 | 1/34 |
Total | 68 record(s). |