- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-444 | Callithrix jacchus | gga-miR-451 | 23/23 | Contig40 | - | 35-57 | 745579-745684 | 0.999784 | Ortholog | 12/26 | 1/27 |
2 | calJac1-444 | Callithrix jacchus | mdo-miR-451 | 21/22 | Contig40 | - | 35-56 | 745579-745684 | 0.999835 | Ortholog | 12/26 | 1/27 |
3 | cavPor3-462 | Cavia porcellus | mdo-miR-451 | 21/22 | scaffold_32 | + | 31-52 | 23622483-23622580 | 0.99992 | Ortholog | 12/26 | 1/27 |
4 | cavPor3-462 | Cavia porcellus | gga-miR-451 | 23/23 | scaffold_32 | + | 34-56 | 23622480-23622583 | 0.999863 | Ortholog | 12/26 | 1/27 |
5 | dasNov1-96 | Dasypus novemcinctus | gga-miR-451 | 23/23 | scaffold_183328 | + | 26-48 | N/A | 0.999383 | Ortholog | 12/26 | 1/27 |
6 | dasNov1-96 | Dasypus novemcinctus | mdo-miR-451 | 21/22 | scaffold_183328 | + | 26-47 | N/A | 0.999612 | Ortholog | 12/26 | 1/27 |
7 | equCab1-74 | Equus caballus | mdo-miR-451 | 22/22 | chr11 | - | 31-52 | 41537881-41537978 | 0.999621 | Ortholog | 12/26 | 1/27 |
8 | equCab1-74 | Equus caballus | gga-miR-451 | 22/23 | chr11 | - | 31-53 | 41537881-41537978 | 0.999456 | Ortholog | 12/26 | 1/27 |
9 | felCat3-133 | Felis catus | gga-miR-451 | 23/23 | scaffold_151431 | - | 35-57 | 36434-36538 | 0.999499 | Ortholog | 12/26 | 1/27 |
10 | felCat3-133 | Felis catus | mdo-miR-451 | 21/22 | scaffold_151431 | - | 35-56 | 36434-36538 | 0.999609 | Ortholog | 12/26 | 1/27 |
11 | gasAcu1-332 | Gasterosteus aculeatus | gga-miR-451 | 23/23 | chrVII | + | 32-54 | 14937135-14937236 | 0.998588 | Ortholog | 12/26 | 1/27 |
12 | gasAcu1-332 | Gasterosteus aculeatus | mdo-miR-451 | 21/22 | chrVII | + | 31-52 | 14937136-14937234 | 0.999037 | Ortholog | 12/26 | 1/27 |
13 | loxAfr1-201 | Loxodonta africana | gga-miR-451 | 23/23 | scaffold_33459 | + | 35-57 | N/A | 0.990517 | Ortholog | 12/26 | 1/27 |
14 | loxAfr1-201 | Loxodonta africana | mdo-miR-451 | 21/22 | scaffold_33459 | + | 50-71 | N/A | 0.879853 | Ortholog | 12/26 | 1/27 |
15 | oryLat2-111 | Oryzias latipes | gga-miR-451 | 23/23 | chr14 | + | 32-54 | 21443645-21443746 | 0.998785 | Ortholog | 12/26 | 1/27 |
16 | oryLat2-111 | Oryzias latipes | mdo-miR-451 | 21/22 | chr14 | + | 27-48 | 21443650-21443740 | 0.9992 | Ortholog | 12/26 | 1/27 |
17 | otoGar1-198 | Otolemur garnettii | gga-miR-451 | 23/23 | scaffold_116934.1-123538 | - | 31-53 | N/A | 0.999479 | Ortholog | 12/26 | 1/27 |
18 | otoGar1-198 | Otolemur garnettii | mdo-miR-451 | 21/22 | scaffold_116934.1-123538 | - | 31-52 | N/A | 0.999599 | Ortholog | 12/26 | 1/27 |
19 | ponAbe2-305 | Pongo abelii | gga-miR-451 | 23/23 | chr17 | - | 36-58 | 23605604-23605709 | 0.999703 | Ortholog | 12/26 | 1/27 |
20 | ponAbe2-305 | Pongo abelii | mdo-miR-451 | 21/22 | chr17 | - | 36-57 | 23605604-23605709 | 0.999749 | Ortholog | 12/26 | 1/27 |
21 | sorAra1-39 | Sorex araneus | mdo-miR-451 | 21/22 | scaffold_184030 | + | 16-37 | N/A | 0.999449 | Ortholog | 12/26 | 1/27 |
22 | sorAra1-39 | Sorex araneus | gga-miR-451 | 23/23 | scaffold_184030 | + | 16-38 | N/A | 0.999153 | Ortholog | 12/26 | 1/27 |
23 | taeGut1-116 | Taeniopygia guttata | mdo-miR-451 | 21/22 | chr19 | - | 43-64 | 7265358-7265445 | 0.979227 | Ortholog | 12/26 | 1/27 |
24 | taeGut1-116 | Taeniopygia guttata | gga-miR-451 | 23/23 | chr19 | - | 43-65 | 7265358-7265445 | 0.990524 | Ortholog | 12/26 | 1/27 |
25 | tetNig1-184 | Tetraodon nigroviridis | gga-miR-451 | 23/23 | chr7 | - | 32-54 | 2201963-2202064 | 0.999258 | Ortholog | 12/26 | 1/27 |
26 | tetNig1-184 | Tetraodon nigroviridis | mdo-miR-451 | 21/22 | chr7 | - | 32-53 | 2201963-2202064 | 0.999386 | Ortholog | 12/26 | 1/27 |
27 | tupBel1-671 | Tupaia belangeri | mdo-miR-451 | 21/22 | scaffold_146979.1-134698 | - | 35-56 | N/A | 0.999683 | Ortholog | 12/26 | 1/27 |
28 | tupBel1-671 | Tupaia belangeri | gga-miR-451 | 23/23 | scaffold_146979.1-134698 | - | 35-57 | N/A | 0.999584 | Ortholog | 12/26 | 1/27 |
Total | 28 record(s). |