- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-452 | Bos taurus | bta-miR-452 | 22/22 | chrX | - | 17-38 | N/A | - | miRBase_13_0 | 6/17 | 1/19 |
2 | calJac1-509 | Callithrix jacchus | hsa-miR-452 | 22/22 | Contig5036 | - | 14-35 | 198012-198096 | 0.998983 | Ortholog | 6/17 | 1/19 |
3 | calJac1-509 | Callithrix jacchus | mmu-miR-452 | 22/22 | Contig5036 | - | 19-40 | 198009-198098 | 0.999398 | Ortholog | 6/17 | 1/19 |
4 | cfa-mir-452 | Canis familiaris | cfa-miR-452 | 22/22 | chrX | - | 14-35 | N/A | - | miRBase_13_0 | 6/17 | 1/19 |
5 | cavPor3-309 | Cavia porcellus | hsa-miR-452 | 22/22 | scaffold_197 | - | 14-35 | 1057798-1057882 | 0.999511 | Ortholog | 6/17 | 1/19 |
6 | cavPor3-309 | Cavia porcellus | mmu-miR-452 | 22/22 | scaffold_197 | - | 18-39 | 1057796-1057883 | 0.999643 | Ortholog | 6/17 | 1/19 |
7 | echTel1-149 | Echinops telfari | hsa-miR-452 | 22/22 | scaffold_278299 | - | 14-35 | N/A | 0.994536 | Ortholog | 6/17 | 1/19 |
8 | echTel1-149 | Echinops telfari | mmu-miR-452 | 22/22 | scaffold_278299 | - | 18-39 | N/A | 0.995159 | Ortholog | 6/17 | 1/19 |
9 | eriEur1-22 | Erinaceus europaeus | hsa-miR-452 | 22/22 | scaffold_207797 | - | 14-35 | N/A | 0.999835 | Ortholog | 6/17 | 1/19 |
10 | eriEur1-22 | Erinaceus europaeus | mmu-miR-452 | 22/22 | scaffold_207797 | - | 19-40 | N/A | 0.999911 | Ortholog | 6/17 | 1/19 |
11 | felCat3-317 | Felis catus | hsa-miR-452 | 22/22 | scaffold_205143 | - | 14-35 | 29700-29784 | 0.880032 | Ortholog | 6/17 | 1/19 |
12 | felCat3-317 | Felis catus | mmu-miR-452 | 22/22 | scaffold_205143 | - | 17-38 | 29700-29784 | 0.927139 | Ortholog | 6/17 | 1/19 |
13 | hsa-mir-452 | Homo sapiens | hsa-miR-452* | 22/22 | chrX | - | 58-79 | 150878756-150878840 | - | miRBase_13_0 | 6/17 | 1/19 |
14 | hsa-mir-452 | Homo sapiens | hsa-miR-452 | 22/22 | chrX | - | 14-35 | 150878756-150878840 | - | miRBase_13_0 | 6/17 | 1/19 |
15 | loxAfr1-57 | Loxodonta africana | mmu-miR-452 | 22/22 | scaffold_14281 | + | 17-38 | N/A | 0.999643 | Ortholog | 6/17 | 1/19 |
16 | loxAfr1-57 | Loxodonta africana | hsa-miR-452 | 22/22 | scaffold_14281 | + | 11-32 | N/A | 0.999571 | Ortholog | 6/17 | 1/19 |
17 | mml-mir-452 | Macaca mulatta | mml-miR-452 | 22/22 | chrX | - | 14-35 | N/A | - | miRBase_13_0 | 6/17 | 2/19 |
18 | rheMac2-330 | Macaca mulatta | mml-miR-452 | 20/22 | chr9 | + | 25-45 | 100596660-100596753 | 0.828509 | Paralog | 6/17 | 2/19 |
19 | mm9-503 | Mus musculus | hsa-miR-452 | 20/22 | chr7 | - | 15-35 | 119792263-119792343 | 0.998495 | Paralog | 6/17 | 2/19 |
20 | mmu-mir-452 | Mus musculus | mmu-miR-452 | 22/22 | chrX | - | 17-38 | N/A | - | miRBase_13_0 | 6/17 | 2/19 |
21 | otoGar1-288 | Otolemur garnettii | mmu-miR-452 | 22/22 | scaffold_17645.1-72940 | - | 21-42 | N/A | 0.999681 | Ortholog | 6/17 | 1/19 |
22 | otoGar1-288 | Otolemur garnettii | hsa-miR-452 | 22/22 | scaffold_17645.1-72940 | - | 14-35 | N/A | 0.999511 | Ortholog | 6/17 | 1/19 |
23 | ptr-mir-452 | Pan troglodytes | ptr-miR-452 | 22/22 | chrX | - | 14-35 | N/A | - | miRBase_13_0 | 6/17 | 1/19 |
24 | ponAbe2-843 | Pongo abelii | hsa-miR-452 | 22/22 | chrX | - | 14-35 | 152093484-152093568 | 0.999511 | Ortholog | 6/17 | 1/19 |
25 | ponAbe2-843 | Pongo abelii | mmu-miR-452 | 22/22 | chrX | - | 19-40 | 152093481-152093570 | 0.999719 | Ortholog | 6/17 | 1/19 |
26 | sorAra1-221 | Sorex araneus | mmu-miR-452 | 20/22 | scaffold_260743 | + | 45-64 | N/A | 0.99606 | Ortholog | 6/17 | 1/19 |
27 | tetNig1-37 | Tetraodon nigroviridis | mmu-miR-452 | 20/22 | chr12 | - | 13-34 | 3867885-3867967 | 0.99785 | Ortholog | 6/17 | 1/19 |
28 | tupBel1-1610 | Tupaia belangeri | mmu-miR-452 | 22/22 | scaffold_97275.1-66026 | - | 18-39 | N/A | 0.993197 | Ortholog | 6/17 | 1/19 |
29 | tupBel1-1610 | Tupaia belangeri | hsa-miR-452 | 22/22 | scaffold_97275.1-66026 | - | 14-35 | N/A | 0.987356 | Ortholog | 6/17 | 1/19 |
Total | 29 record(s). |