- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-247 | Anolis carolinensis | gga-miR-455-3p | 22/22 | scaffold_473 | - | 49-70 | 926222-926299 | 0.999458 | Ortholog | 12/26 | 1/31 |
2 | anoCar1-247 | Anolis carolinensis | bta-miR-455* | 22/22 | scaffold_473 | - | 49-70 | 926223-926298 | 0.999455 | Ortholog | 12/26 | 1/31 |
3 | anoCar1-247 | Anolis carolinensis | bta-miR-455 | 20/21 | scaffold_473 | - | 14-34 | 926219-926301 | 0.999839 | Ortholog | 12/26 | 1/31 |
4 | bta-mir-455 | Bos taurus | bta-miR-455* | 22/22 | chr8 | + | 54-75 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
5 | bta-mir-455 | Bos taurus | bta-miR-455 | 21/21 | chr8 | + | 16-36 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
6 | calJac1-575 | Callithrix jacchus | gga-miR-455-3p | 22/22 | Contig6373 | - | 49-70 | 73095-73172 | 0.999142 | Ortholog | 12/26 | 1/31 |
7 | calJac1-575 | Callithrix jacchus | mmu-miR-455 | 20/21 | Contig6373 | - | 50-70 | 73095-73172 | 0.998036 | Ortholog | 12/26 | 1/31 |
8 | calJac1-575 | Callithrix jacchus | bta-miR-455 | 21/21 | Contig6373 | - | 21-41 | 73091-73181 | 0.999894 | Ortholog | 12/26 | 1/31 |
9 | calJac1-575 | Callithrix jacchus | bta-miR-455* | 22/22 | Contig6373 | - | 49-70 | 73096-73171 | 0.999106 | Ortholog | 12/26 | 1/31 |
10 | calJac1-575 | Callithrix jacchus | hsa-miR-455-5p | 22/22 | Contig6373 | - | 21-42 | 73090-73181 | 0.999837 | Ortholog | 12/26 | 1/31 |
11 | cfa-mir-455 | Canis familiaris | cfa-miR-455 | 22/22 | chr11 | + | 1-22 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
12 | cavPor3-337 | Cavia porcellus | hsa-miR-455-5p | 22/22 | scaffold_2 | - | 21-42 | 77905887-77905978 | 0.999837 | Ortholog | 12/26 | 1/31 |
13 | cavPor3-337 | Cavia porcellus | bta-miR-455 | 21/21 | scaffold_2 | - | 21-41 | 77905888-77905978 | 0.999894 | Ortholog | 12/26 | 1/31 |
14 | cavPor3-337 | Cavia porcellus | bta-miR-455* | 22/22 | scaffold_2 | - | 49-70 | 77905891-77905968 | 0.999142 | Ortholog | 12/26 | 1/31 |
15 | cavPor3-337 | Cavia porcellus | mmu-miR-455 | 20/21 | scaffold_2 | - | 50-70 | 77905892-77905969 | 0.998036 | Ortholog | 12/26 | 1/31 |
16 | dre-mir-455 | Danio rerio | dre-miR-455 | 22/22 | chr5 | - | 16-37 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
17 | echTel1-383 | Echinops telfari | bta-miR-455 | 21/21 | scaffold_324163 | - | 21-41 | N/A | 0.999894 | Ortholog | 12/26 | 1/31 |
18 | echTel1-383 | Echinops telfari | hsa-miR-455-5p | 22/22 | scaffold_324163 | - | 21-42 | N/A | 0.999837 | Ortholog | 12/26 | 1/31 |
19 | echTel1-383 | Echinops telfari | gga-miR-455-3p | 22/22 | scaffold_324163 | - | 49-70 | N/A | 0.999142 | Ortholog | 12/26 | 1/31 |
20 | echTel1-383 | Echinops telfari | mmu-miR-455 | 20/21 | scaffold_324163 | - | 50-70 | N/A | 0.998036 | Ortholog | 12/26 | 1/31 |
21 | echTel1-383 | Echinops telfari | bta-miR-455* | 22/22 | scaffold_324163 | - | 49-70 | N/A | 0.999106 | Ortholog | 12/26 | 1/31 |
22 | eriEur1-262 | Erinaceus europaeus | mmu-miR-455 | 20/21 | scaffold_367782 | + | 51-71 | N/A | 0.998536 | Ortholog | 12/26 | 1/31 |
23 | eriEur1-262 | Erinaceus europaeus | bta-miR-455 | 21/21 | scaffold_367782 | + | 14-34 | N/A | 0.999873 | Ortholog | 12/26 | 1/31 |
24 | eriEur1-262 | Erinaceus europaeus | bta-miR-455* | 22/22 | scaffold_367782 | + | 51-72 | N/A | 0.998757 | Ortholog | 12/26 | 1/31 |
25 | eriEur1-262 | Erinaceus europaeus | hsa-miR-455-5p | 22/22 | scaffold_367782 | + | 14-35 | N/A | 0.999805 | Ortholog | 12/26 | 1/31 |
26 | eriEur1-262 | Erinaceus europaeus | gga-miR-455-3p | 22/22 | scaffold_367782 | + | 51-72 | N/A | 0.999433 | Ortholog | 12/26 | 1/31 |
27 | felCat3-388 | Felis catus | mmu-miR-455 | 20/21 | scaffold_217022 | + | 51-71 | 358188-358268 | 0.998536 | Ortholog | 12/26 | 1/31 |
28 | felCat3-388 | Felis catus | hsa-miR-455-5p | 22/22 | scaffold_217022 | + | 15-36 | 358186-358268 | 0.999867 | Ortholog | 12/26 | 1/31 |
29 | felCat3-388 | Felis catus | gga-miR-455-3p | 22/22 | scaffold_217022 | + | 51-72 | 358187-358269 | 0.999379 | Ortholog | 12/26 | 1/31 |
30 | felCat3-388 | Felis catus | bta-miR-455* | 22/22 | scaffold_217022 | + | 51-72 | 358188-358268 | 0.998757 | Ortholog | 12/26 | 1/31 |
31 | felCat3-388 | Felis catus | bta-miR-455 | 21/21 | scaffold_217022 | + | 15-35 | 358186-358268 | 0.999795 | Ortholog | 12/26 | 1/31 |
32 | fr2-166 | Fugu rubripes | bta-miR-455* | 22/22 | chrUn | - | 49-70 | 19211430-19211505 | 0.998302 | Paralog | 12/26 | 3/31 |
33 | fr2-166 | Fugu rubripes | gga-miR-455-3p | 22/22 | chrUn | - | 49-70 | 19211429-19211506 | 0.998811 | Paralog | 12/26 | 3/31 |
34 | fr2-166 | Fugu rubripes | bta-miR-455 | 20/21 | chrUn | - | 15-35 | 19211426-19211509 | 0.999503 | Paralog | 12/26 | 3/31 |
35 | fr2-166 | Fugu rubripes | mmu-miR-455 | 20/21 | chrUn | - | 50-70 | 19211429-19211506 | 0.997252 | Paralog | 12/26 | 3/31 |
36 | fr2-166 | Fugu rubripes | hsa-miR-455-5p | 21/22 | chrUn | - | 16-37 | 19211424-19211510 | 0.999208 | Paralog | 12/26 | 3/31 |
37 | fr2-51 | Fugu rubripes | gga-miR-455-3p | 22/22 | chrUn | + | 51-72 | 111067947-111068029 | 0.999617 | Paralog | 12/26 | 3/31 |
38 | fr2-51 | Fugu rubripes | bta-miR-455* | 22/22 | chrUn | + | 51-72 | 111067948-111068028 | 0.999179 | Paralog | 12/26 | 3/31 |
39 | fr2-51 | Fugu rubripes | mmu-miR-455 | 20/21 | chrUn | + | 51-71 | 111067948-111068028 | 0.99903 | Paralog | 12/26 | 3/31 |
40 | fr2-51 | Fugu rubripes | hsa-miR-455-5p | 21/22 | chrUn | + | 15-36 | 111067946-111068029 | 0.999632 | Paralog | 12/26 | 3/31 |
41 | fr2-51 | Fugu rubripes | bta-miR-455 | 20/21 | chrUn | + | 15-35 | 111067946-111068029 | 0.999778 | Paralog | 12/26 | 3/31 |
42 | fru-mir-455 | Fugu rubripes | fru-miR-455 | 22/22 | scaffold_49 | + | 15-36 | N/A | - | miRBase_13_0 | 12/26 | 3/31 |
43 | gga-mir-455 | Gallus gallus | gga-miR-455-5p | 22/22 | chr17 | + | 16-37 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
44 | gga-mir-455 | Gallus gallus | gga-miR-455-3p | 22/22 | chr17 | + | 53-74 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
45 | gasAcu1-502 | Gasterosteus aculeatus | gga-miR-455-3p | 22/22 | chrXIII | + | 51-72 | 17724934-17725016 | 0.999951 | Ortholog | 12/26 | 2/31 |
46 | gasAcu1-502 | Gasterosteus aculeatus | bta-miR-455 | 20/21 | chrXIII | + | 14-34 | 17724934-17725016 | 0.999963 | Ortholog | 12/26 | 2/31 |
47 | gasAcu1-502 | Gasterosteus aculeatus | hsa-miR-455-5p | 21/22 | chrXIII | + | 14-35 | 17724934-17725016 | 0.999945 | Ortholog | 12/26 | 2/31 |
48 | gasAcu1-502 | Gasterosteus aculeatus | bta-miR-455* | 22/22 | chrXIII | + | 51-72 | 17724935-17725015 | 0.999902 | Ortholog | 12/26 | 2/31 |
49 | gasAcu1-502 | Gasterosteus aculeatus | mmu-miR-455 | 20/21 | chrXIII | + | 51-71 | 17724935-17725015 | 0.999867 | Ortholog | 12/26 | 2/31 |
50 | gasAcu1-533 | Gasterosteus aculeatus | hsa-miR-455-5p | 21/22 | chrXIV | - | 19-40 | 3002385-3002474 | 0.999635 | Ortholog | 12/26 | 2/31 |
51 | gasAcu1-533 | Gasterosteus aculeatus | gga-miR-455-3p | 22/22 | chrXIV | - | 49-70 | 3002390-3002467 | 0.999458 | Ortholog | 12/26 | 2/31 |
52 | gasAcu1-533 | Gasterosteus aculeatus | mmu-miR-455 | 20/21 | chrXIV | - | 50-70 | 3002390-3002467 | 0.99875 | Ortholog | 12/26 | 2/31 |
53 | gasAcu1-533 | Gasterosteus aculeatus | bta-miR-455 | 20/21 | chrXIV | - | 15-35 | 3002387-3002470 | 0.999778 | Ortholog | 12/26 | 2/31 |
54 | gasAcu1-533 | Gasterosteus aculeatus | bta-miR-455* | 22/22 | chrXIV | - | 49-70 | 3002391-3002466 | 0.999446 | Ortholog | 12/26 | 2/31 |
55 | hsa-mir-455 | Homo sapiens | hsa-miR-455-3p | 21/21 | chr9 | + | 54-74 | 116011535-116011630 | - | miRBase_13_0 | 12/26 | 1/31 |
56 | hsa-mir-455 | Homo sapiens | hsa-miR-455-5p | 22/22 | chr9 | + | 16-37 | 116011535-116011630 | - | miRBase_13_0 | 12/26 | 1/31 |
57 | loxAfr1-182 | Loxodonta africana | gga-miR-455-3p | 22/22 | scaffold_32489 | - | 49-70 | N/A | 0.999142 | Ortholog | 12/26 | 1/31 |
58 | loxAfr1-182 | Loxodonta africana | mmu-miR-455 | 20/21 | scaffold_32489 | - | 50-70 | N/A | 0.998036 | Ortholog | 12/26 | 1/31 |
59 | loxAfr1-182 | Loxodonta africana | bta-miR-455* | 22/22 | scaffold_32489 | - | 49-70 | N/A | 0.999106 | Ortholog | 12/26 | 1/31 |
60 | loxAfr1-182 | Loxodonta africana | bta-miR-455 | 21/21 | scaffold_32489 | - | 21-41 | N/A | 0.999894 | Ortholog | 12/26 | 1/31 |
61 | loxAfr1-182 | Loxodonta africana | hsa-miR-455-5p | 22/22 | scaffold_32489 | - | 21-42 | N/A | 0.999837 | Ortholog | 12/26 | 1/31 |
62 | mml-mir-455 | Macaca mulatta | mml-miR-455-3p | 21/21 | chr15 | - | 54-74 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
63 | mml-mir-455 | Macaca mulatta | mml-miR-455-5p | 22/22 | chr15 | - | 16-37 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
64 | monDom4-71 | Monodelphis domestica | gga-miR-455-3p | 22/22 | chr1 | - | 49-70 | 451465633-451465710 | 0.999574 | Ortholog | 12/26 | 1/31 |
65 | monDom4-71 | Monodelphis domestica | mmu-miR-455 | 20/21 | chr1 | - | 50-70 | 451465633-451465710 | 0.999016 | Ortholog | 12/26 | 1/31 |
66 | monDom4-71 | Monodelphis domestica | bta-miR-455* | 22/22 | chr1 | - | 49-70 | 451465634-451465709 | 0.999567 | Ortholog | 12/26 | 1/31 |
67 | monDom4-71 | Monodelphis domestica | bta-miR-455 | 20/21 | chr1 | - | 14-34 | 451465630-451465712 | 0.999871 | Ortholog | 12/26 | 1/31 |
68 | monDom4-71 | Monodelphis domestica | hsa-miR-455-5p | 21/22 | chr1 | - | 18-39 | 451465628-451465716 | 0.999792 | Ortholog | 12/26 | 1/31 |
69 | mmu-mir-455 | Mus musculus | mmu-miR-455 | 21/21 | chr4 | + | 54-74 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
70 | mmu-mir-455 | Mus musculus | mmu-miR-455* | 22/22 | chr4 | + | 17-38 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
71 | oryCun1-489 | Oryctolagus cuniculus | gga-miR-455-3p | 22/22 | scaffold_214303 | + | 51-72 | N/A | 0.999379 | Ortholog | 12/26 | 1/31 |
72 | oryCun1-489 | Oryctolagus cuniculus | bta-miR-455* | 22/22 | scaffold_214303 | + | 51-72 | N/A | 0.998757 | Ortholog | 12/26 | 1/31 |
73 | oryCun1-489 | Oryctolagus cuniculus | bta-miR-455 | 21/21 | scaffold_214303 | + | 19-39 | N/A | 0.999894 | Ortholog | 12/26 | 1/31 |
74 | oryCun1-489 | Oryctolagus cuniculus | mmu-miR-455 | 20/21 | scaffold_214303 | + | 51-71 | N/A | 0.998536 | Ortholog | 12/26 | 1/31 |
75 | oryCun1-489 | Oryctolagus cuniculus | hsa-miR-455-5p | 22/22 | scaffold_214303 | + | 19-40 | N/A | 0.99985 | Ortholog | 12/26 | 1/31 |
76 | oryLat2-59 | Oryzias latipes | bta-miR-455 | 20/21 | chr12 | - | 14-34 | 7386667-7386749 | 0.999777 | Ortholog | 12/26 | 1/31 |
77 | oryLat2-59 | Oryzias latipes | bta-miR-455* | 22/22 | chr12 | - | 49-70 | 7386671-7386746 | 0.999446 | Ortholog | 12/26 | 1/31 |
78 | oryLat2-59 | Oryzias latipes | hsa-miR-455-5p | 21/22 | chr12 | - | 14-35 | 7386667-7386749 | 0.999634 | Ortholog | 12/26 | 1/31 |
79 | oryLat2-59 | Oryzias latipes | mmu-miR-455 | 20/21 | chr12 | - | 50-70 | 7386670-7386747 | 0.99875 | Ortholog | 12/26 | 1/31 |
80 | oryLat2-59 | Oryzias latipes | gga-miR-455-3p | 22/22 | chr12 | - | 49-70 | 7386670-7386747 | 0.999458 | Ortholog | 12/26 | 1/31 |
81 | otoGar1-422 | Otolemur garnettii | gga-miR-455-3p | 22/22 | scaffold_88551.1-150568 | + | 51-72 | N/A | 0.999379 | Ortholog | 12/26 | 1/31 |
82 | otoGar1-422 | Otolemur garnettii | bta-miR-455* | 22/22 | scaffold_88551.1-150568 | + | 51-72 | N/A | 0.998757 | Ortholog | 12/26 | 1/31 |
83 | otoGar1-422 | Otolemur garnettii | bta-miR-455 | 21/21 | scaffold_88551.1-150568 | + | 19-39 | N/A | 0.999894 | Ortholog | 12/26 | 1/31 |
84 | otoGar1-422 | Otolemur garnettii | hsa-miR-455-5p | 22/22 | scaffold_88551.1-150568 | + | 19-40 | N/A | 0.99985 | Ortholog | 12/26 | 1/31 |
85 | otoGar1-422 | Otolemur garnettii | mmu-miR-455 | 20/21 | scaffold_88551.1-150568 | + | 51-71 | N/A | 0.998536 | Ortholog | 12/26 | 1/31 |
86 | ptr-mir-455 | Pan troglodytes | ptr-miR-455 | 21/21 | chr9 | + | 53-73 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
87 | ponAbe2-746 | Pongo abelii | bta-miR-455 | 21/21 | chr9 | + | 19-39 | 110748760-110748847 | 0.999894 | Ortholog | 12/26 | 1/31 |
88 | ponAbe2-746 | Pongo abelii | bta-miR-455* | 22/22 | chr9 | + | 51-72 | 110748766-110748846 | 0.998757 | Ortholog | 12/26 | 1/31 |
89 | ponAbe2-746 | Pongo abelii | hsa-miR-455-5p | 22/22 | chr9 | + | 19-40 | 110748760-110748847 | 0.99985 | Ortholog | 12/26 | 1/31 |
90 | ponAbe2-746 | Pongo abelii | mmu-miR-455 | 20/21 | chr9 | + | 51-71 | 110748766-110748846 | 0.998536 | Ortholog | 12/26 | 1/31 |
91 | ponAbe2-746 | Pongo abelii | gga-miR-455-3p | 22/22 | chr9 | + | 51-72 | 110748765-110748847 | 0.999379 | Ortholog | 12/26 | 1/31 |
92 | rno-mir-455 | Rattus norvegicus | rno-miR-455 | 22/22 | chr5 | + | 11-32 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
93 | taeGut1-18 | Taeniopygia guttata | gga-miR-455-3p | 20/22 | chr1 | - | 9-30 | 32566044-32566122 | 0.810971 | Ortholog | 12/26 | 2/31 |
94 | taeGut1-90 | Taeniopygia guttata | hsa-miR-455-5p | 21/22 | chr17 | + | 14-35 | 5173167-5173249 | 0.999647 | Ortholog | 12/26 | 2/31 |
95 | taeGut1-90 | Taeniopygia guttata | gga-miR-455-3p | 22/22 | chr17 | + | 51-72 | 5173167-5173249 | 0.999629 | Ortholog | 12/26 | 2/31 |
96 | taeGut1-90 | Taeniopygia guttata | mmu-miR-455 | 20/21 | chr17 | + | 51-71 | 5173168-5173248 | 0.999061 | Ortholog | 12/26 | 2/31 |
97 | taeGut1-90 | Taeniopygia guttata | bta-miR-455 | 20/21 | chr17 | + | 14-34 | 5173167-5173249 | 0.999784 | Ortholog | 12/26 | 2/31 |
98 | taeGut1-90 | Taeniopygia guttata | bta-miR-455* | 22/22 | chr17 | + | 51-72 | 5173168-5173248 | 0.999206 | Ortholog | 12/26 | 2/31 |
99 | tetNig1-253 | Tetraodon nigroviridis | hsa-miR-455-5p | 21/22 | chrUn_random | + | 15-36 | 154794372-154794455 | 0.999632 | Paralog | 12/26 | 2/31 |
100 | tetNig1-253 | Tetraodon nigroviridis | gga-miR-455-3p | 22/22 | chrUn_random | + | 51-72 | 154794373-154794455 | 0.999617 | Paralog | 12/26 | 2/31 |
101 | tetNig1-253 | Tetraodon nigroviridis | mmu-miR-455 | 20/21 | chrUn_random | + | 51-71 | 154794374-154794454 | 0.99903 | Paralog | 12/26 | 2/31 |
102 | tetNig1-253 | Tetraodon nigroviridis | bta-miR-455 | 20/21 | chrUn_random | + | 15-35 | 154794372-154794455 | 0.999778 | Paralog | 12/26 | 2/31 |
103 | tetNig1-253 | Tetraodon nigroviridis | bta-miR-455* | 22/22 | chrUn_random | + | 51-72 | 154794374-154794454 | 0.999179 | Paralog | 12/26 | 2/31 |
104 | tni-mir-455 | Tetraodon nigroviridis | tni-miR-455 | 22/22 | chr12 | - | 15-36 | N/A | - | miRBase_13_0 | 12/26 | 2/31 |
105 | xtr-mir-455 | Xenopus tropicalis | xtr-miR-455 | 22/22 | scaffold_154 | - | 16-37 | N/A | - | miRBase_13_0 | 12/26 | 1/31 |
Total | 105 record(s). |