- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | dre-mir-458 | Danio rerio | dre-miR-458 | 22/22 | chr14 | - | 48-69 | N/A | - | miRBase_13_0 | 5/9 | 1/10 |
2 | fru-mir-458 | Fugu rubripes | fru-miR-458 | 22/22 | scaffold_3295 | + | 45-66 | N/A | - | miRBase_13_0 | 5/9 | 1/10 |
3 | galGal3-94 | Gallus gallus | oan-miR-458* | 20/20 | chrUn_random | + | 14-33 | 30704148-30704229 | 0.999947 | Paralog | 5/9 | 2/10 |
4 | galGal3-94 | Gallus gallus | tni-miR-458 | 20/22 | chrUn_random | + | 50-71 | 30704148-30704229 | 0.999976 | Paralog | 5/9 | 2/10 |
5 | galGal3-94 | Gallus gallus | gga-miR-458* | 21/21 | chrUn_random | + | 16-36 | 30704146-30704230 | 0.999963 | Paralog | 5/9 | 2/10 |
6 | gga-mir-458 | Gallus gallus | gga-miR-458* | 21/21 | chr13 | - | 30-50 | N/A | - | miRBase_13_0 | 5/9 | 2/10 |
7 | gga-mir-458 | Gallus gallus | gga-miR-458 | 22/22 | chr13 | - | 66-87 | N/A | - | miRBase_13_0 | 5/9 | 2/10 |
8 | gasAcu1-133 | Gasterosteus aculeatus | oan-miR-458* | 20/20 | chrIV | - | 15-34 | 4267167-4267249 | 0.999849 | Ortholog | 5/9 | 1/10 |
9 | gasAcu1-133 | Gasterosteus aculeatus | gga-miR-458* | 21/21 | chrIV | - | 15-35 | 4267167-4267249 | 0.999897 | Ortholog | 5/9 | 1/10 |
10 | gasAcu1-133 | Gasterosteus aculeatus | tni-miR-458 | 21/22 | chrIV | - | 48-69 | 4267169-4267247 | 0.999958 | Ortholog | 5/9 | 1/10 |
11 | oan-mir-458 | Ornithorhynchus anatinus | oan-miR-458 | 22/22 | Contig30484 | - | 68-89 | N/A | - | miRBase_13_0 | 5/9 | 1/10 |
12 | oan-mir-458 | Ornithorhynchus anatinus | oan-miR-458* | 20/20 | Contig30484 | - | 32-51 | N/A | - | miRBase_13_0 | 5/9 | 1/10 |
13 | oryLat2-31 | Oryzias latipes | gga-miR-458* | 21/21 | chr10 | - | 14-34 | 25327855-25327935 | 0.971076 | Ortholog | 5/9 | 1/10 |
14 | oryLat2-31 | Oryzias latipes | oan-miR-458* | 20/20 | chr10 | - | 14-33 | 25327855-25327935 | 0.967092 | Ortholog | 5/9 | 1/10 |
15 | oryLat2-31 | Oryzias latipes | tni-miR-458 | 20/22 | chr10 | - | 49-70 | 25327855-25327935 | 0.985089 | Ortholog | 5/9 | 1/10 |
16 | taeGut1-62 | Taeniopygia guttata | gga-miR-458* | 19/21 | chr13 | - | 16-35 | 1397258-1397342 | 0.996878 | Ortholog | 5/9 | 1/10 |
17 | taeGut1-62 | Taeniopygia guttata | tni-miR-458 | 20/22 | chr13 | - | 49-70 | 1397260-1397339 | 0.999708 | Ortholog | 5/9 | 1/10 |
18 | tni-mir-458 | Tetraodon nigroviridis | tni-miR-458 | 22/22 | chr1_random | - | 47-68 | N/A | - | miRBase_13_0 | 5/9 | 1/10 |
19 | xenTro2-77 | Xenopus tropicalis | gga-miR-458* | 20/21 | scaffold_530 | - | 17-37 | 522839-522925 | 0.982517 | Ortholog | 5/9 | 1/10 |
20 | xenTro2-77 | Xenopus tropicalis | oan-miR-458* | 19/20 | scaffold_530 | - | 17-36 | 522839-522925 | 0.969571 | Ortholog | 5/9 | 1/10 |
21 | xenTro2-77 | Xenopus tropicalis | dre-miR-458 | 20/22 | scaffold_530 | - | 50-69 | 522841-522922 | 0.998526 | Ortholog | 5/9 | 1/10 |
Total | 21 record(s). |