- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-485 | Bos taurus | bta-miR-485 | 23/23 | chr21 | + | 9-31 | N/A | - | miRBase_13_0 | 7/16 | 1/17 |
2 | calJac1-257 | Callithrix jacchus | hsa-miR-485-5p | 22/22 | Contig2207 | - | 17-38 | 215616-215703 | 0.997732 | Ortholog | 7/16 | 1/17 |
3 | calJac1-257 | Callithrix jacchus | mmu-miR-485* | 22/22 | Contig2207 | - | 49-70 | 215619-215699 | 0.99614 | Ortholog | 7/16 | 1/17 |
4 | calJac1-257 | Callithrix jacchus | cfa-miR-485 | 23/23 | Contig2207 | - | 17-39 | 215616-215703 | 0.995528 | Ortholog | 7/16 | 1/17 |
5 | calJac1-257 | Callithrix jacchus | hsa-miR-485-3p | 22/22 | Contig2207 | - | 49-70 | 215620-215698 | 0.994077 | Ortholog | 7/16 | 1/17 |
6 | cfa-mir-485 | Canis familiaris | cfa-miR-485 | 23/23 | chr8 | + | 1-23 | N/A | - | miRBase_13_0 | 7/16 | 1/17 |
7 | danRer5-251 | Danio rerio | hsa-miR-485-3p | 20/22 | chr4 | + | 51-71 | 10597116-10597207 | 0.956417 | Ortholog | 7/16 | 1/17 |
8 | dasNov1-272 | Dasypus novemcinctus | hsa-miR-485-5p | 22/22 | scaffold_5303 | - | 16-37 | N/A | 0.999172 | Ortholog | 7/16 | 1/17 |
9 | dasNov1-272 | Dasypus novemcinctus | hsa-miR-485-3p | 22/22 | scaffold_5303 | - | 49-70 | N/A | 0.996851 | Ortholog | 7/16 | 1/17 |
10 | dasNov1-272 | Dasypus novemcinctus | cfa-miR-485 | 23/23 | scaffold_5303 | - | 16-38 | N/A | 0.998226 | Ortholog | 7/16 | 1/17 |
11 | dasNov1-272 | Dasypus novemcinctus | mmu-miR-485* | 22/22 | scaffold_5303 | - | 49-70 | N/A | 0.997894 | Ortholog | 7/16 | 1/17 |
12 | equCab1-356 | Equus caballus | mmu-miR-485* | 22/22 | chr24 | + | 51-72 | 42425061-42425145 | 0.997131 | Ortholog | 7/16 | 1/17 |
13 | equCab1-356 | Equus caballus | cfa-miR-485 | 23/23 | chr24 | + | 16-38 | 42425060-42425145 | 0.995652 | Ortholog | 7/16 | 1/17 |
14 | equCab1-356 | Equus caballus | hsa-miR-485-3p | 22/22 | chr24 | + | 51-72 | 42425062-42425144 | 0.995304 | Ortholog | 7/16 | 1/17 |
15 | equCab1-356 | Equus caballus | hsa-miR-485-5p | 22/22 | chr24 | + | 14-35 | 42425062-42425144 | 0.997756 | Ortholog | 7/16 | 1/17 |
16 | eriEur1-185 | Erinaceus europaeus | hsa-miR-485-3p | 21/22 | scaffold_353701 | - | 49-70 | N/A | 0.996163 | Ortholog | 7/16 | 1/17 |
17 | eriEur1-185 | Erinaceus europaeus | cfa-miR-485 | 21/23 | scaffold_353701 | - | 16-38 | N/A | 0.99906 | Ortholog | 7/16 | 1/17 |
18 | eriEur1-185 | Erinaceus europaeus | mmu-miR-485* | 21/22 | scaffold_353701 | - | 49-70 | N/A | 0.997178 | Ortholog | 7/16 | 1/17 |
19 | felCat3-111 | Felis catus | mmu-miR-485* | 22/22 | scaffold_147198 | + | 51-72 | 41975-42059 | 0.99837 | Ortholog | 7/16 | 1/17 |
20 | felCat3-111 | Felis catus | cfa-miR-485 | 23/23 | scaffold_147198 | + | 16-38 | 41974-42059 | 0.998549 | Ortholog | 7/16 | 1/17 |
21 | felCat3-111 | Felis catus | hsa-miR-485-3p | 22/22 | scaffold_147198 | + | 50-71 | 41977-42057 | 0.998107 | Ortholog | 7/16 | 1/17 |
22 | felCat3-111 | Felis catus | hsa-miR-485-5p | 22/22 | scaffold_147198 | + | 15-36 | 41975-42058 | 0.999271 | Ortholog | 7/16 | 1/17 |
23 | hsa-mir-485 | Homo sapiens | hsa-miR-485-3p | 22/22 | chr14 | + | 46-67 | 100591509-100591581 | - | miRBase_13_0 | 7/16 | 1/17 |
24 | hsa-mir-485 | Homo sapiens | hsa-miR-485-5p | 22/22 | chr14 | + | 9-30 | 100591509-100591581 | - | miRBase_13_0 | 7/16 | 1/17 |
25 | mml-mir-485 | Macaca mulatta | mml-miR-485-5p | 22/22 | chr7 | + | 9-30 | N/A | - | miRBase_13_0 | 7/16 | 2/17 |
26 | mml-mir-485 | Macaca mulatta | mml-miR-485-3p | 22/22 | chr7 | + | 46-67 | N/A | - | miRBase_13_0 | 7/16 | 2/17 |
27 | rheMac2-214 | Macaca mulatta | mml-miR-485-5p | 20/22 | chr20 | + | 51-72 | 47669290-47669366 | 0.988542 | Paralog | 7/16 | 2/17 |
28 | mmu-mir-485 | Mus musculus | mmu-miR-485* | 22/22 | chr12 | + | 45-66 | N/A | - | miRBase_13_0 | 7/16 | 1/17 |
29 | mmu-mir-485 | Mus musculus | mmu-miR-485 | 22/22 | chr12 | + | 9-30 | N/A | - | miRBase_13_0 | 7/16 | 1/17 |
30 | oryCun1-49 | Oryctolagus cuniculus | hsa-miR-485-3p | 22/22 | scaffold_125203 | + | 51-72 | N/A | 0.994102 | Ortholog | 7/16 | 1/17 |
31 | oryCun1-49 | Oryctolagus cuniculus | mmu-miR-485* | 22/22 | scaffold_125203 | + | 51-72 | N/A | 0.988123 | Ortholog | 7/16 | 1/17 |
32 | otoGar1-169 | Otolemur garnettii | hsa-miR-485-5p | 22/22 | scaffold_116158.1-127804 | + | 15-36 | N/A | 0.997799 | Ortholog | 7/16 | 1/17 |
33 | otoGar1-169 | Otolemur garnettii | hsa-miR-485-3p | 22/22 | scaffold_116158.1-127804 | + | 50-71 | N/A | 0.995483 | Ortholog | 7/16 | 1/17 |
34 | otoGar1-169 | Otolemur garnettii | mmu-miR-485* | 22/22 | scaffold_116158.1-127804 | + | 51-72 | N/A | 0.996095 | Ortholog | 7/16 | 1/17 |
35 | otoGar1-169 | Otolemur garnettii | cfa-miR-485 | 23/23 | scaffold_116158.1-127804 | + | 15-37 | N/A | 0.995528 | Ortholog | 7/16 | 1/17 |
36 | ptr-mir-485 | Pan troglodytes | ptr-miR-485 | 22/22 | chr14 | + | 45-66 | N/A | - | miRBase_13_0 | 7/16 | 1/17 |
37 | ponAbe2-229 | Pongo abelii | hsa-miR-485-5p | 22/22 | chr14 | + | 15-36 | 102618114-102618197 | 0.997799 | Ortholog | 7/16 | 1/17 |
38 | ponAbe2-229 | Pongo abelii | hsa-miR-485-3p | 22/22 | chr14 | + | 50-71 | 102618116-102618196 | 0.995483 | Ortholog | 7/16 | 1/17 |
39 | ponAbe2-229 | Pongo abelii | mmu-miR-485* | 22/22 | chr14 | + | 51-72 | 102618114-102618198 | 0.996095 | Ortholog | 7/16 | 1/17 |
40 | ponAbe2-229 | Pongo abelii | cfa-miR-485 | 23/23 | chr14 | + | 15-37 | 102618114-102618198 | 0.995528 | Ortholog | 7/16 | 1/17 |
41 | rno-mir-485 | Rattus norvegicus | rno-miR-485 | 22/22 | chr6 | + | 12-33 | N/A | - | miRBase_13_0 | 7/16 | 1/17 |
Total | 41 record(s). |