- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-488 | Bos taurus | bta-miR-488 | 21/21 | chr16 | - | 52-72 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
2 | calJac1-204 | Callithrix jacchus | mmu-miR-488* | 20/21 | Contig1892 | - | 14-34 | 122093-122175 | 0.92457 | Ortholog | 7/16 | 1/16 |
3 | cfa-mir-488 | Canis familiaris | cfa-miR-488 | 21/21 | chr7 | + | 14-34 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
4 | dasNov1-193 | Dasypus novemcinctus | mmu-miR-488 | 20/21 | scaffold_3284 | + | 51-71 | N/A | 0.994145 | Ortholog | 7/16 | 1/16 |
5 | dasNov1-193 | Dasypus novemcinctus | cfa-miR-488 | 20/21 | scaffold_3284 | + | 14-34 | N/A | 0.803252 | Ortholog | 7/16 | 1/16 |
6 | echTel1-336 | Echinops telfari | hsa-miR-488 | 19/21 | scaffold_314909 | + | 52-70 | N/A | 0.943033 | Ortholog | 7/16 | 1/16 |
7 | equCab1-503 | Equus caballus | mmu-miR-488* | 20/21 | chr5 | - | 14-34 | 12203830-12203912 | 0.838693 | Ortholog | 7/16 | 1/16 |
8 | felCat3-31 | Felis catus | mmu-miR-488* | 20/21 | scaffold_128145 | - | 14-34 | 198520-198602 | 0.838693 | Ortholog | 7/16 | 1/16 |
9 | hsa-mir-488 | Homo sapiens | hsa-miR-488* | 21/21 | chr1 | - | 14-34 | 175265122-175265204 | - | miRBase_13_0 | 7/16 | 1/16 |
10 | hsa-mir-488 | Homo sapiens | hsa-miR-488 | 21/21 | chr1 | - | 52-72 | 175265122-175265204 | - | miRBase_13_0 | 7/16 | 1/16 |
11 | mml-mir-488 | Macaca mulatta | mml-miR-488 | 21/21 | chr1 | - | 52-72 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
12 | mmu-mir-488 | Mus musculus | mmu-miR-488* | 21/21 | chr1 | + | 27-47 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
13 | mmu-mir-488 | Mus musculus | mmu-miR-488 | 21/21 | chr1 | + | 65-85 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
14 | oryLat2-443 | Oryzias latipes | mmu-miR-488 | 19/21 | scaffold5571 | + | 30-49 | 1039-1136 | 0.998 | Ortholog | 7/16 | 1/16 |
15 | otoGar1-272 | Otolemur garnettii | mmu-miR-488 | 20/21 | scaffold_15328.1-288801 | + | 51-71 | N/A | 0.994145 | Ortholog | 7/16 | 1/16 |
16 | ptr-mir-488 | Pan troglodytes | ptr-miR-488 | 21/21 | chr1 | - | 52-72 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
17 | ponAbe2-14 | Pongo abelii | mmu-miR-488 | 20/21 | chr1 | + | 51-71 | 73870649-73870729 | 0.997629 | Ortholog | 7/16 | 1/16 |
18 | ponAbe2-14 | Pongo abelii | mmu-miR-488* | 20/21 | chr1 | + | 14-34 | 73870648-73870730 | 0.94872 | Ortholog | 7/16 | 1/16 |
19 | rno-mir-488 | Rattus norvegicus | rno-miR-488 | 21/21 | chr13 | + | 49-69 | N/A | - | miRBase_13_0 | 7/16 | 1/16 |
20 | tupBel1-595 | Tupaia belangeri | mmu-miR-488* | 20/21 | scaffold_144354.1-887256 | + | 14-34 | N/A | 0.900949 | Ortholog | 7/16 | 1/16 |
Total | 20 record(s). |