- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-16 | Anolis carolinensis | oan-miR-490* | 23/23 | scaffold_105 | - | 49-71 | 1509901-1509977 | 0.923764 | Ortholog | 8/22 | 1/23 |
2 | anoCar1-16 | Anolis carolinensis | hsa-miR-490-3p | 22/22 | scaffold_105 | - | 49-70 | 1509901-1509977 | 0.834482 | Ortholog | 8/22 | 1/23 |
3 | bta-mir-490 | Bos taurus | bta-miR-490 | 22/22 | chr4 | + | 75-96 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
4 | calJac1-498 | Callithrix jacchus | hsa-miR-490-3p | 22/22 | Contig4840 | + | 49-70 | 159157-159235 | 0.978244 | Ortholog | 8/22 | 1/23 |
5 | calJac1-498 | Callithrix jacchus | oan-miR-490* | 23/23 | Contig4840 | + | 49-71 | 159157-159235 | 0.986241 | Ortholog | 8/22 | 1/23 |
6 | cfa-mir-490 | Canis familiaris | cfa-miR-490 | 22/22 | chr16 | - | 56-77 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
7 | cavPor3-32 | Cavia porcellus | oan-miR-490* | 23/23 | scaffold_10 | - | 49-71 | 11766905-11766983 | 0.973953 | Ortholog | 8/22 | 1/23 |
8 | cavPor3-32 | Cavia porcellus | hsa-miR-490-3p | 22/22 | scaffold_10 | - | 49-70 | 11766905-11766983 | 0.939222 | Ortholog | 8/22 | 1/23 |
9 | equCab1-683 | Equus caballus | oan-miR-490* | 23/23 | chrUn | - | 49-71 | 56635586-56635664 | 0.973137 | Ortholog | 8/22 | 1/23 |
10 | equCab1-683 | Equus caballus | hsa-miR-490-3p | 22/22 | chrUn | - | 49-70 | 56635586-56635664 | 0.936647 | Ortholog | 8/22 | 1/23 |
11 | eriEur1-328 | Erinaceus europaeus | hsa-miR-490-3p | 22/22 | scaffold_379006 | - | 49-70 | N/A | 0.936647 | Ortholog | 8/22 | 1/23 |
12 | eriEur1-328 | Erinaceus europaeus | hsa-miR-490-5p | 20/20 | scaffold_379006 | - | 15-34 | N/A | 0.94733 | Ortholog | 8/22 | 1/23 |
13 | eriEur1-328 | Erinaceus europaeus | oan-miR-490* | 23/23 | scaffold_379006 | - | 49-71 | N/A | 0.973137 | Ortholog | 8/22 | 1/23 |
14 | felCat3-260 | Felis catus | oan-miR-490* | 23/23 | scaffold_194287 | + | 49-71 | 483-561 | 0.973137 | Ortholog | 8/22 | 1/23 |
15 | felCat3-260 | Felis catus | hsa-miR-490-3p | 22/22 | scaffold_194287 | + | 49-70 | 483-561 | 0.936647 | Ortholog | 8/22 | 1/23 |
16 | felCat3-260 | Felis catus | hsa-miR-490-5p | 20/20 | scaffold_194287 | + | 12-31 | 483-561 | 0.94733 | Ortholog | 8/22 | 1/23 |
17 | gga-mir-490 | Gallus gallus | gga-miR-490 | 22/22 | chr1 | - | 57-78 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
18 | hsa-mir-490 | Homo sapiens | hsa-miR-490-5p | 20/20 | chr7 | + | 39-58 | 136238454-136238581 | - | miRBase_13_0 | 8/22 | 1/23 |
19 | hsa-mir-490 | Homo sapiens | hsa-miR-490-3p | 22/22 | chr7 | + | 76-97 | 136238454-136238581 | - | miRBase_13_0 | 8/22 | 1/23 |
20 | loxAfr1-41 | Loxodonta africana | oan-miR-490* | 23/23 | scaffold_13288 | + | 49-71 | N/A | 0.987551 | Ortholog | 8/22 | 1/23 |
21 | loxAfr1-41 | Loxodonta africana | hsa-miR-490-3p | 22/22 | scaffold_13288 | + | 51-72 | N/A | 0.971757 | Ortholog | 8/22 | 1/23 |
22 | loxAfr1-41 | Loxodonta africana | hsa-miR-490-5p | 20/20 | scaffold_13288 | + | 14-33 | N/A | 0.971606 | Ortholog | 8/22 | 1/23 |
23 | mml-mir-490 | Macaca mulatta | mml-miR-490-3p | 22/22 | chr3 | + | 76-97 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
24 | mml-mir-490 | Macaca mulatta | mml-miR-490-5p | 20/20 | chr3 | + | 39-58 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
25 | mmu-mir-490 | Mus musculus | mmu-miR-490 | 22/22 | chr6 | + | 59-80 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
26 | oan-mir-490 | Ornithorhynchus anatinus | oan-miR-490* | 23/23 | chr10 | + | 67-89 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
27 | oan-mir-490 | Ornithorhynchus anatinus | oan-miR-490 | 20/20 | chr10 | + | 30-49 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
28 | oryCun1-254 | Oryctolagus cuniculus | oan-miR-490* | 23/23 | scaffold_195793 | + | 45-67 | N/A | 0.974699 | Ortholog | 8/22 | 1/23 |
29 | oryCun1-254 | Oryctolagus cuniculus | hsa-miR-490-3p | 22/22 | scaffold_195793 | + | 45-66 | N/A | 0.962594 | Ortholog | 8/22 | 1/23 |
30 | oryCun1-254 | Oryctolagus cuniculus | hsa-miR-490-5p | 20/20 | scaffold_195793 | + | 8-27 | N/A | 0.987524 | Ortholog | 8/22 | 1/23 |
31 | otoGar1-452 | Otolemur garnettii | oan-miR-490* | 23/23 | scaffold_92351.1-382732 | + | 50-72 | N/A | 0.993697 | Ortholog | 8/22 | 1/23 |
32 | otoGar1-452 | Otolemur garnettii | hsa-miR-490-3p | 22/22 | scaffold_92351.1-382732 | + | 50-71 | N/A | 0.985666 | Ortholog | 8/22 | 1/23 |
33 | ptr-mir-490 | Pan troglodytes | ptr-miR-490 | 22/22 | chr7 | + | 75-96 | N/A | - | miRBase_13_0 | 8/22 | 1/23 |
34 | ponAbe2-675 | Pongo abelii | oan-miR-490* | 23/23 | chr7 | + | 49-71 | 134015011-134015089 | 0.986241 | Ortholog | 8/22 | 1/23 |
35 | ponAbe2-675 | Pongo abelii | hsa-miR-490-3p | 22/22 | chr7 | + | 49-70 | 134015011-134015089 | 0.978244 | Ortholog | 8/22 | 1/23 |
36 | rn4-225 | Rattus norvegicus | oan-miR-490* | 23/23 | chr4 | + | 49-71 | 63815397-63815475 | 0.97002 | Ortholog | 8/22 | 1/23 |
37 | rn4-225 | Rattus norvegicus | hsa-miR-490-5p | 20/20 | chr4 | + | 12-31 | 63815397-63815475 | 0.941448 | Ortholog | 8/22 | 1/23 |
38 | rn4-225 | Rattus norvegicus | hsa-miR-490-3p | 22/22 | chr4 | + | 49-70 | 63815397-63815475 | 0.930097 | Ortholog | 8/22 | 1/23 |
39 | sorAra1-108 | Sorex araneus | hsa-miR-490-5p | 20/20 | scaffold_235819 | - | 15-34 | N/A | 0.946465 | Ortholog | 8/22 | 1/23 |
40 | sorAra1-108 | Sorex araneus | hsa-miR-490-3p | 21/22 | scaffold_235819 | - | 49-70 | N/A | 0.982261 | Ortholog | 8/22 | 1/23 |
41 | sorAra1-108 | Sorex araneus | oan-miR-490* | 22/23 | scaffold_235819 | - | 49-71 | N/A | 0.991878 | Ortholog | 8/22 | 1/23 |
42 | taeGut1-135 | Taeniopygia guttata | hsa-miR-490-3p | 22/22 | chr1A | + | 51-72 | 58337872-58337952 | 0.964095 | Ortholog | 8/22 | 2/23 |
43 | taeGut1-135 | Taeniopygia guttata | oan-miR-490* | 23/23 | chr1A | + | 50-72 | 58337873-58337951 | 0.979861 | Ortholog | 8/22 | 2/23 |
44 | taeGut1-135 | Taeniopygia guttata | hsa-miR-490-5p | 20/20 | chr1A | + | 11-30 | 58337873-58337951 | 0.987314 | Ortholog | 8/22 | 2/23 |
45 | taeGut1-344 | Taeniopygia guttata | hsa-miR-490-5p | 20/20 | chrUn | + | 11-30 | 87366754-87366832 | 0.979427 | Ortholog | 8/22 | 2/23 |
46 | taeGut1-344 | Taeniopygia guttata | hsa-miR-490-3p | 22/22 | chrUn | + | 51-72 | 87366753-87366833 | 0.944946 | Ortholog | 8/22 | 2/23 |
47 | taeGut1-344 | Taeniopygia guttata | oan-miR-490* | 23/23 | chrUn | + | 50-72 | 87366754-87366832 | 0.968819 | Ortholog | 8/22 | 2/23 |
48 | tupBel1-1536 | Tupaia belangeri | oan-miR-490* | 23/23 | scaffold_3977.1-369353 | + | 49-71 | N/A | 0.966966 | Ortholog | 8/22 | 1/23 |
49 | tupBel1-1536 | Tupaia belangeri | hsa-miR-490-3p | 22/22 | scaffold_3977.1-369353 | + | 49-70 | N/A | 0.923701 | Ortholog | 8/22 | 1/23 |
50 | tupBel1-1536 | Tupaia belangeri | hsa-miR-490-5p | 20/20 | scaffold_3977.1-369353 | + | 12-31 | N/A | 0.938219 | Ortholog | 8/22 | 1/23 |
Total | 50 record(s). |