- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-500 | Bos taurus | bta-miR-500 | 23/23 | chrX | - | 13-35 | N/A | - | miRBase_13_0 | 7/16 | 1/24 |
2 | canFam2-307 | Canis familiaris | cfa-miR-500 | 19/21 | chrX | + | 52-71 | 42735330-42735413 | 0.999455 | Paralog | 7/16 | 2/24 |
3 | canFam2-307 | Canis familiaris | hsa-miR-500 | 23/23 | chrX | + | 12-34 | 42735331-42735412 | 0.999919 | Paralog | 7/16 | 2/24 |
4 | cfa-mir-500 | Canis familiaris | cfa-miR-500 | 21/21 | chrX | + | 39-59 | N/A | - | miRBase_13_0 | 7/16 | 2/24 |
5 | cavPor3-212 | Cavia porcellus | mmu-miR-500 | 21/22 | scaffold_132 | + | 51-72 | 3014235-3014318 | 0.996991 | Ortholog | 7/16 | 1/24 |
6 | equCab1-762 | Equus caballus | mmu-miR-500 | 20/22 | chrX | + | 51-71 | 30192184-30192267 | 0.944771 | Ortholog | 7/16 | 3/24 |
7 | equCab1-762 | Equus caballus | hsa-miR-500* | 20/22 | chrX | + | 52-71 | 30192184-30192267 | 0.920503 | Ortholog | 7/16 | 3/24 |
8 | equCab1-765 | Equus caballus | mmu-miR-500 | 20/22 | chrX | + | 51-71 | 30193999-30194082 | 0.996248 | Ortholog | 7/16 | 3/24 |
9 | equCab1-765 | Equus caballus | hsa-miR-500* | 20/22 | chrX | + | 53-72 | 30193999-30194082 | 0.976608 | Ortholog | 7/16 | 3/24 |
10 | equCab1-765 | Equus caballus | hsa-miR-500 | 23/23 | chrX | + | 12-34 | 30194000-30194081 | 0.999082 | Ortholog | 7/16 | 3/24 |
11 | equCab1-768 | Equus caballus | hsa-miR-500* | 20/22 | chrX | + | 52-71 | 30196306-30196389 | 0.999626 | Ortholog | 7/16 | 3/24 |
12 | equCab1-768 | Equus caballus | mmu-miR-500 | 21/22 | chrX | + | 51-72 | 30196306-30196389 | 0.99986 | Ortholog | 7/16 | 3/24 |
13 | eriEur1-161 | Erinaceus europaeus | mmu-miR-500 | 21/22 | scaffold_346158 | + | 51-72 | N/A | 0.999352 | Ortholog | 7/16 | 1/24 |
14 | eriEur1-161 | Erinaceus europaeus | hsa-miR-500* | 20/22 | scaffold_346158 | + | 52-71 | N/A | 0.997864 | Ortholog | 7/16 | 1/24 |
15 | felCat3-303 | Felis catus | cfa-miR-500 | 19/21 | scaffold_203135 | + | 52-70 | 1487-1568 | 0.99554 | Ortholog | 7/16 | 2/24 |
16 | felCat3-303 | Felis catus | hsa-miR-500 | 23/23 | scaffold_203135 | + | 12-34 | 1487-1568 | 0.999582 | Ortholog | 7/16 | 2/24 |
17 | felCat3-304 | Felis catus | mmu-miR-500 | 21/22 | scaffold_203135 | + | 51-72 | 5821-5904 | 0.999699 | Ortholog | 7/16 | 2/24 |
18 | felCat3-304 | Felis catus | hsa-miR-500* | 20/22 | scaffold_203135 | + | 52-71 | 5821-5904 | 0.999271 | Ortholog | 7/16 | 2/24 |
19 | hsa-mir-500 | Homo sapiens | hsa-miR-500 | 23/23 | chrX | + | 13-35 | 49659779-49659862 | - | miRBase_13_0 | 7/16 | 1/24 |
20 | hsa-mir-500 | Homo sapiens | hsa-miR-500* | 22/22 | chrX | + | 52-73 | 49659779-49659862 | - | miRBase_13_0 | 7/16 | 1/24 |
21 | mml-mir-500 | Macaca mulatta | mml-miR-500 | 23/23 | chrX | + | 13-35 | N/A | - | miRBase_13_0 | 7/16 | 2/24 |
22 | rheMac2-347 | Macaca mulatta | mml-miR-500 | 23/23 | chrX | + | 12-34 | 47647180-47647261 | 0.999867 | Paralog | 7/16 | 2/24 |
23 | mmu-mir-500 | Mus musculus | mmu-miR-500 | 22/22 | chrX | - | 59-80 | N/A | - | miRBase_13_0 | 7/16 | 1/24 |
24 | oryCun1-397 | Oryctolagus cuniculus | mmu-miR-500 | 21/22 | scaffold_207556 | - | 49-70 | N/A | 0.999633 | Ortholog | 7/16 | 2/24 |
25 | oryCun1-397 | Oryctolagus cuniculus | hsa-miR-500* | 20/22 | scaffold_207556 | - | 50-69 | N/A | 0.99915 | Ortholog | 7/16 | 2/24 |
26 | oryCun1-470 | Oryctolagus cuniculus | hsa-miR-500 | 23/23 | scaffold_213094 | + | 12-34 | N/A | 0.996635 | Ortholog | 7/16 | 2/24 |
27 | oryCun1-470 | Oryctolagus cuniculus | hsa-miR-500* | 20/22 | scaffold_213094 | + | 52-71 | N/A | 0.979853 | Ortholog | 7/16 | 2/24 |
28 | oryCun1-470 | Oryctolagus cuniculus | mmu-miR-500 | 21/22 | scaffold_213094 | + | 51-72 | N/A | 0.991968 | Ortholog | 7/16 | 2/24 |
29 | otoGar1-224 | Otolemur garnettii | hsa-miR-500* | 22/22 | scaffold_118155.1-7231 | + | 51-72 | N/A | 0.998318 | Ortholog | 7/16 | 2/24 |
30 | otoGar1-224 | Otolemur garnettii | hsa-miR-500 | 23/23 | scaffold_118155.1-7231 | + | 12-34 | N/A | 0.999566 | Ortholog | 7/16 | 2/24 |
31 | otoGar1-224 | Otolemur garnettii | cfa-miR-500 | 21/21 | scaffold_118155.1-7231 | + | 51-71 | N/A | 0.998965 | Ortholog | 7/16 | 2/24 |
32 | otoGar1-224 | Otolemur garnettii | mmu-miR-500 | 20/22 | scaffold_118155.1-7231 | + | 51-71 | N/A | 0.998142 | Ortholog | 7/16 | 2/24 |
33 | otoGar1-227 | Otolemur garnettii | mmu-miR-500 | 21/22 | scaffold_118155.1-7231 | + | 51-72 | N/A | 0.999874 | Ortholog | 7/16 | 2/24 |
34 | otoGar1-227 | Otolemur garnettii | hsa-miR-500* | 20/22 | scaffold_118155.1-7231 | + | 52-71 | N/A | 0.999674 | Ortholog | 7/16 | 2/24 |
35 | ptr-mir-500 | Pan troglodytes | ptr-miR-500 | 23/23 | chrX | + | 12-34 | N/A | - | miRBase_13_0 | 7/16 | 1/24 |
36 | ponAbe2-779 | Pongo abelii | hsa-miR-500* | 22/22 | chrX | + | 51-72 | 50541282-50541363 | 0.991035 | Ortholog | 7/16 | 2/24 |
37 | ponAbe2-779 | Pongo abelii | mmu-miR-500 | 20/22 | chrX | + | 51-71 | 50541281-50541364 | 0.98523 | Ortholog | 7/16 | 2/24 |
38 | ponAbe2-779 | Pongo abelii | cfa-miR-500 | 21/21 | chrX | + | 51-71 | 50541282-50541363 | 0.994365 | Ortholog | 7/16 | 2/24 |
39 | ponAbe2-784 | Pongo abelii | mmu-miR-500 | 21/22 | chrX | + | 51-72 | 50547690-50547773 | 0.999937 | Ortholog | 7/16 | 2/24 |
40 | ponAbe2-784 | Pongo abelii | hsa-miR-500* | 20/22 | chrX | + | 52-71 | 50547690-50547773 | 0.999829 | Ortholog | 7/16 | 2/24 |
41 | rno-mir-500 | Rattus norvegicus | rno-miR-500 | 22/22 | chrX | + | 49-70 | N/A | - | miRBase_13_0 | 7/16 | 1/24 |
42 | sorAra1-112 | Sorex araneus | hsa-miR-500* | 21/22 | scaffold_236451 | - | 50-70 | N/A | 0.994718 | Ortholog | 7/16 | 1/24 |
43 | sorAra1-112 | Sorex araneus | mmu-miR-500 | 20/22 | scaffold_236451 | - | 50-70 | N/A | 0.991037 | Ortholog | 7/16 | 1/24 |
44 | sorAra1-112 | Sorex araneus | hsa-miR-500 | 23/23 | scaffold_236451 | - | 15-37 | N/A | 0.995434 | Ortholog | 7/16 | 1/24 |
45 | tupBel1-850 | Tupaia belangeri | hsa-miR-500 | 23/23 | scaffold_148198.1-205369 | + | 12-34 | N/A | 0.999914 | Ortholog | 7/16 | 1/24 |
Total | 45 record(s). |