- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-504 | Bos taurus | bta-miR-504 | 22/22 | chrX | - | 13-34 | N/A | - | miRBase_13_0 | 6/17 | 1/17 |
2 | calJac1-403 | Callithrix jacchus | bta-miR-504 | 21/22 | Contig3572 | - | 13-34 | 82953-83035 | 0.999428 | Ortholog | 6/17 | 1/17 |
3 | cfa-mir-504 | Canis familiaris | cfa-miR-504 | 22/22 | chrX | - | 13-34 | N/A | - | miRBase_13_0 | 6/17 | 1/17 |
4 | cavPor3-721 | Cavia porcellus | bta-miR-504 | 21/22 | scaffold_79 | + | 12-33 | 3501364-3501443 | 0.999518 | Ortholog | 6/17 | 1/17 |
5 | dasNov1-354 | Dasypus novemcinctus | bta-miR-504 | 21/22 | scaffold_8217 | + | 12-33 | N/A | 0.99539 | Ortholog | 6/17 | 1/17 |
6 | echTel1-196 | Echinops telfari | bta-miR-504 | 21/22 | scaffold_292052 | + | 14-35 | N/A | 0.999485 | Ortholog | 6/17 | 1/17 |
7 | equCab1-639 | Equus caballus | bta-miR-504 | 21/22 | chrUn | + | 12-33 | 159019266-159019345 | 0.999541 | Ortholog | 6/17 | 1/17 |
8 | eriEur1-18 | Erinaceus europaeus | bta-miR-504 | 21/22 | scaffold_205932 | + | 12-33 | N/A | 0.999152 | Ortholog | 6/17 | 1/17 |
9 | hsa-mir-504 | Homo sapiens | hsa-miR-504 | 22/22 | chrX | - | 13-34 | 137577538-137577620 | - | miRBase_13_0 | 6/17 | 1/17 |
10 | mml-mir-504 | Macaca mulatta | mml-miR-504 | 22/22 | chrX | - | 13-34 | N/A | - | miRBase_13_0 | 6/17 | 1/17 |
11 | mmu-mir-504 | Mus musculus | mmu-miR-504 | 22/22 | chrX | - | 11-32 | N/A | - | miRBase_13_0 | 6/17 | 1/17 |
12 | oryCun1-238 | Oryctolagus cuniculus | bta-miR-504 | 21/22 | scaffold_193634 | - | 15-36 | N/A | 0.999589 | Ortholog | 6/17 | 1/17 |
13 | ptr-mir-504 | Pan troglodytes | ptr-miR-504 | 22/22 | chrX | - | 13-34 | N/A | - | miRBase_13_0 | 6/17 | 1/17 |
14 | ponAbe2-818 | Pongo abelii | bta-miR-504 | 21/22 | chrX | - | 13-34 | 138277858-138277940 | 0.999617 | Ortholog | 6/17 | 1/17 |
15 | rn4-367 | Rattus norvegicus | bta-miR-504 | 22/22 | chrX | - | 14-35 | 144243828-144243911 | 0.999029 | Ortholog | 6/17 | 1/17 |
16 | sorAra1-174 | Sorex araneus | bta-miR-504 | 21/22 | scaffold_251472 | + | 14-35 | N/A | 0.999137 | Ortholog | 6/17 | 1/17 |
17 | tupBel1-953 | Tupaia belangeri | bta-miR-504 | 21/22 | scaffold_149122.1-291286 | - | 13-34 | N/A | 0.999513 | Ortholog | 6/17 | 1/17 |
Total | 17 record(s). |