- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-175 | Callithrix jacchus | ptr-miR-520c | 22/22 | Contig1869 | + | 15-36 | 348357-348440 | 0.999946 | Ortholog | 3/7 | 2/47 |
2 | calJac1-180 | Callithrix jacchus | ptr-miR-520c | 22/22 | Contig1869 | + | 17-38 | 396027-396112 | 0.999987 | Ortholog | 3/7 | 2/47 |
3 | hsa-mir-520a | Homo sapiens | hsa-miR-520a-5p | 21/21 | chr19 | + | 15-35 | 58885947-58886031 | - | miRBase_13_0 | 3/7 | 8/47 |
4 | hsa-mir-520a | Homo sapiens | hsa-miR-520a-3p | 22/22 | chr19 | + | 53-74 | 58885947-58886031 | - | miRBase_13_0 | 3/7 | 8/47 |
5 | hsa-mir-520b | Homo sapiens | hsa-miR-520b | 21/21 | chr19 | + | 41-61 | 58896293-58896353 | - | miRBase_13_0 | 3/7 | 8/47 |
6 | hsa-mir-520c | Homo sapiens | hsa-miR-520c-3p | 22/22 | chr19 | + | 54-75 | 58902519-58902605 | - | miRBase_13_0 | 3/7 | 8/47 |
7 | hsa-mir-520c | Homo sapiens | hsa-miR-520c-5p | 22/22 | chr19 | + | 16-37 | 58902519-58902605 | - | miRBase_13_0 | 3/7 | 8/47 |
8 | hsa-mir-520d | Homo sapiens | hsa-miR-520d-5p | 20/20 | chr19 | + | 16-35 | 58915162-58915248 | - | miRBase_13_0 | 3/7 | 8/47 |
9 | hsa-mir-520d | Homo sapiens | hsa-miR-520d-3p | 22/22 | chr19 | + | 54-75 | 58915162-58915248 | - | miRBase_13_0 | 3/7 | 8/47 |
10 | hsa-mir-520e | Homo sapiens | hsa-miR-520e | 21/21 | chr19 | + | 54-74 | 58870777-58870863 | - | miRBase_13_0 | 3/7 | 8/47 |
11 | hsa-mir-520f | Homo sapiens | hsa-miR-520f | 22/22 | chr19 | + | 55-76 | 58877225-58877311 | - | miRBase_13_0 | 3/7 | 8/47 |
12 | hsa-mir-520g | Homo sapiens | hsa-miR-520g | 24/24 | chr19 | + | 55-78 | 58917232-58917321 | - | miRBase_13_0 | 3/7 | 8/47 |
13 | hsa-mir-520h | Homo sapiens | hsa-miR-520h | 22/22 | chr19 | + | 55-76 | 58937578-58937665 | - | miRBase_13_0 | 3/7 | 8/47 |
14 | mml-mir-520a | Macaca mulatta | mml-miR-520a | 22/22 | chr19 | + | 53-74 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
15 | mml-mir-520b | Macaca mulatta | mml-miR-520b | 21/21 | N/A | N/A | 41-61 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
16 | mml-mir-520c | Macaca mulatta | mml-miR-520c | 23/23 | N/A | N/A | 54-76 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
17 | mml-mir-520d | Macaca mulatta | mml-miR-520d-5p | 20/20 | N/A | N/A | 16-35 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
18 | mml-mir-520d | Macaca mulatta | mml-miR-520d-3p | 22/22 | N/A | N/A | 54-75 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
19 | mml-mir-520e | Macaca mulatta | mml-miR-520e | 21/21 | N/A | N/A | 48-68 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
20 | mml-mir-520f | Macaca mulatta | mml-miR-520f | 22/22 | N/A | N/A | 55-76 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
21 | mml-mir-520g | Macaca mulatta | mml-miR-520g | 24/24 | chr19 | + | 55-78 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
22 | mml-mir-520h | Macaca mulatta | mml-miR-520h | 22/22 | N/A | N/A | 56-77 | N/A | - | miRBase_13_0 | 3/7 | 10/47 |
23 | rheMac2-170 | Macaca mulatta | mml-miR-520d-3p | 22/22 | chr19 | + | 51-72 | 59847855-59847935 | 0.999867 | Paralog | 3/7 | 10/47 |
24 | rheMac2-174 | Macaca mulatta | mml-miR-520d-3p | 22/22 | chr19 | + | 51-72 | 59862791-59862871 | 0.999703 | Paralog | 3/7 | 10/47 |
25 | mm9-305 | Mus musculus | hsa-miR-520a-3p | 20/22 | chr2 | + | 49-70 | 52134513-52134611 | 0.942213 | Ortholog | 3/7 | 1/47 |
26 | oryCun1-184 | Oryctolagus cuniculus | mml-miR-520d-3p | 20/22 | scaffold_180571 | - | 36-56 | N/A | 0.817026 | Ortholog | 3/7 | 1/47 |
27 | ptr-mir-520a | Pan troglodytes | ptr-miR-520a | 22/22 | chr19 | + | 52-73 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
28 | ptr-mir-520b | Pan troglodytes | ptr-miR-520b | 21/21 | chr19 | + | 40-60 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
29 | ptr-mir-520c | Pan troglodytes | ptr-miR-520c | 22/22 | chr19 | + | 16-37 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
30 | ptr-mir-520d | Pan troglodytes | ptr-miR-520d | 22/22 | chr19 | + | 53-74 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
31 | ptr-mir-520e | Pan troglodytes | ptr-miR-520e | 21/21 | chr19 | + | 53-73 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
32 | ptr-mir-520f | Pan troglodytes | ptr-miR-520f | 22/22 | chr19 | + | 54-75 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
33 | ptr-mir-520g | Pan troglodytes | ptr-miR-520g | 24/24 | chr19 | + | 54-77 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
34 | ptr-mir-520h | Pan troglodytes | ptr-miR-520h | 24/24 | chr19 | + | 54-77 | N/A | - | miRBase_13_0 | 3/7 | 8/47 |
35 | ponAbe2-357 | Pongo abelii | hsa-miR-520e | 21/21 | chr19 | + | 51-71 | 55450079-55450161 | 0.99971 | Ortholog | 3/7 | 17/47 |
36 | ponAbe2-363 | Pongo abelii | hsa-miR-520f | 22/22 | chr19 | + | 51-72 | 55457111-55457189 | 0.99997 | Ortholog | 3/7 | 17/47 |
37 | ponAbe2-367 | Pongo abelii | ptr-miR-520c | 22/22 | chr19 | + | 17-38 | 55461724-55461807 | 0.999977 | Ortholog | 3/7 | 17/47 |
38 | ponAbe2-370 | Pongo abelii | hsa-miR-520a-5p | 21/21 | chr19 | + | 14-34 | 55466123-55466205 | 0.999821 | Ortholog | 3/7 | 17/47 |
39 | ponAbe2-370 | Pongo abelii | hsa-miR-520a-3p | 22/22 | chr19 | + | 51-72 | 55466124-55466204 | 0.999867 | Ortholog | 3/7 | 17/47 |
40 | ponAbe2-378 | Pongo abelii | ptr-miR-520c | 22/22 | chr19 | + | 16-37 | 55474121-55474205 | 0.999938 | Ortholog | 3/7 | 17/47 |
41 | ponAbe2-384 | Pongo abelii | hsa-miR-520b | 21/21 | chr19 | + | 51-71 | 55481360-55481440 | 0.99998 | Ortholog | 3/7 | 17/47 |
42 | ponAbe2-384 | Pongo abelii | mml-miR-520c | 23/23 | chr19 | + | 50-72 | 55481361-55481439 | 0.999976 | Ortholog | 3/7 | 17/47 |
43 | ponAbe2-384 | Pongo abelii | hsa-miR-520f | 22/22 | chr19 | + | 51-72 | 55481361-55481439 | 0.999958 | Ortholog | 3/7 | 17/47 |
44 | ponAbe2-384 | Pongo abelii | hsa-miR-520c-3p | 22/22 | chr19 | + | 51-72 | 55481360-55481440 | 0.999982 | Ortholog | 3/7 | 17/47 |
45 | ponAbe2-393 | Pongo abelii | hsa-miR-520d-5p | 20/20 | chr19 | + | 13-32 | 55491993-55492073 | 0.998446 | Ortholog | 3/7 | 17/47 |
46 | ponAbe2-393 | Pongo abelii | hsa-miR-520d-3p | 22/22 | chr19 | + | 51-72 | 55491993-55492073 | 0.998996 | Ortholog | 3/7 | 17/47 |
47 | ponAbe2-397 | Pongo abelii | hsa-miR-520g | 24/24 | chr19 | + | 50-73 | 55494052-55494129 | 0.99846 | Ortholog | 3/7 | 17/47 |
48 | ponAbe2-397 | Pongo abelii | hsa-miR-520h | 22/22 | chr19 | + | 50-71 | 55494051-55494128 | 0.996887 | Ortholog | 3/7 | 17/47 |
49 | ponAbe2-402 | Pongo abelii | hsa-miR-520g | 24/24 | chr19 | + | 49-72 | 55497692-55497769 | 0.998551 | Ortholog | 3/7 | 17/47 |
50 | ponAbe2-402 | Pongo abelii | hsa-miR-520h | 22/22 | chr19 | + | 51-72 | 55497690-55497771 | 0.998859 | Ortholog | 3/7 | 17/47 |
51 | ponAbe2-406 | Pongo abelii | ptr-miR-520c | 22/22 | chr19 | + | 18-39 | 55504433-55504519 | 0.999836 | Ortholog | 3/7 | 17/47 |
52 | ponAbe2-412 | Pongo abelii | hsa-miR-520d-5p | 20/20 | chr19 | + | 13-32 | 55513944-55514024 | 0.999762 | Ortholog | 3/7 | 17/47 |
53 | ponAbe2-415 | Pongo abelii | hsa-miR-520h | 22/22 | chr19 | + | 51-72 | 55517011-55517091 | 0.998665 | Ortholog | 3/7 | 17/47 |
54 | ponAbe2-415 | Pongo abelii | hsa-miR-520g | 24/24 | chr19 | + | 50-73 | 55517012-55517092 | 0.998591 | Ortholog | 3/7 | 17/47 |
55 | ponAbe2-447 | Pongo abelii | ptr-miR-520c | 22/22 | chr19_random | + | 16-37 | 4238360-4238444 | 0.99996 | Ortholog | 3/7 | 17/47 |
56 | ponAbe2-453 | Pongo abelii | ptr-miR-520c | 22/22 | chr19_random | + | 16-37 | 5392852-5392936 | 0.99996 | Ortholog | 3/7 | 17/47 |
57 | ponAbe2-456 | Pongo abelii | hsa-miR-520a-3p | 22/22 | chr19_random | - | 49-70 | 429963-430039 | 0.99985 | Ortholog | 3/7 | 17/47 |
58 | ponAbe2-456 | Pongo abelii | hsa-miR-520a-5p | 21/21 | chr19_random | - | 15-35 | 429959-430043 | 0.999703 | Ortholog | 3/7 | 17/47 |
59 | ponAbe2-458 | Pongo abelii | ptr-miR-520c | 22/22 | chr19_random | - | 17-38 | 434155-434238 | 0.999977 | Ortholog | 3/7 | 17/47 |
60 | ponAbe2-469 | Pongo abelii | ptr-miR-520c | 22/22 | chr19_random | - | 17-38 | 2108479-2108565 | 0.999979 | Ortholog | 3/7 | 17/47 |
Total | 60 record(s). |