- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-182 | Callithrix jacchus | mml-miR-523a | 20/21 | Contig1869 | + | 51-71 | 410150-410227 | 0.999904 | Ortholog | 3/4 | 5/20 |
2 | calJac1-185 | Callithrix jacchus | hsa-miR-523 | 21/23 | Contig1869 | - | 46-68 | 282111-282183 | 0.983215 | Ortholog | 3/4 | 5/20 |
3 | calJac1-189 | Callithrix jacchus | mml-miR-523a | 20/21 | Contig1869 | - | 48-68 | 300024-300100 | 0.942029 | Ortholog | 3/4 | 5/20 |
4 | calJac1-189 | Callithrix jacchus | hsa-miR-523 | 21/23 | Contig1869 | - | 47-69 | 300024-300100 | 0.954281 | Ortholog | 3/4 | 5/20 |
5 | calJac1-190 | Callithrix jacchus | hsa-miR-523 | 21/23 | Contig1869 | - | 49-71 | 382084-382157 | 0.855529 | Ortholog | 3/4 | 5/20 |
6 | calJac1-191 | Callithrix jacchus | hsa-miR-523 | 21/23 | Contig1869 | - | 48-70 | 384890-384969 | 0.981617 | Ortholog | 3/4 | 5/20 |
7 | hg18-100 | Homo sapiens | hsa-miR-523 | 21/23 | chr19 | - | 49-71 | 58924907-58924985 | 0.991598 | Paralog | 3/4 | 4/20 |
8 | hg18-98 | Homo sapiens | hsa-miR-523 | 21/23 | chr19 | - | 49-71 | 58877228-58877306 | 0.996122 | Paralog | 3/4 | 4/20 |
9 | hg18-98 | Homo sapiens | mml-miR-523a | 20/21 | chr19 | - | 50-70 | 58877228-58877306 | 0.994507 | Paralog | 3/4 | 4/20 |
10 | hg18-99 | Homo sapiens | hsa-miR-523 | 21/23 | chr19 | - | 48-70 | 58893454-58893531 | 0.997922 | Paralog | 3/4 | 4/20 |
11 | hsa-mir-523 | Homo sapiens | hsa-miR-523 | 23/23 | chr19 | + | 53-75 | 58893451-58893537 | - | miRBase_13_0 | 3/4 | 4/20 |
12 | hsa-mir-523 | Homo sapiens | hsa-miR-523* | 22/22 | chr19 | + | 16-37 | 58893451-58893537 | - | miRBase_13_0 | 3/4 | 4/20 |
13 | mml-mir-523a | Macaca mulatta | mml-miR-523a | 21/21 | chr19 | + | 54-74 | N/A | - | miRBase_13_0 | 3/4 | 7/20 |
14 | mml-mir-523b | Macaca mulatta | mml-miR-523b | 22/22 | chr19 | + | 16-37 | N/A | - | miRBase_13_0 | 3/4 | 7/20 |
15 | mml-mir-523c-1 | Macaca mulatta | mml-miR-523c | 21/21 | N/A | N/A | 51-71 | N/A | - | miRBase_13_0 | 3/4 | 7/20 |
16 | mml-mir-523c-2 | Macaca mulatta | mml-miR-523c | 21/21 | N/A | N/A | 54-74 | N/A | - | miRBase_13_0 | 3/4 | 7/20 |
17 | rheMac2-182 | Macaca mulatta | hsa-miR-523 | 21/23 | chr19 | - | 49-71 | 59795287-59795365 | 0.839031 | Paralog | 3/4 | 7/20 |
18 | rheMac2-183 | Macaca mulatta | hsa-miR-523 | 21/23 | chr19 | - | 49-71 | 59801660-59801738 | 0.973106 | Paralog | 3/4 | 7/20 |
19 | rheMac2-185 | Macaca mulatta | mml-miR-523a | 20/21 | chr19 | - | 46-66 | 59842542-59842614 | 0.906415 | Paralog | 3/4 | 7/20 |
20 | rheMac2-185 | Macaca mulatta | hsa-miR-523 | 21/23 | chr19 | - | 46-68 | 59842542-59842614 | 0.935975 | Paralog | 3/4 | 7/20 |
21 | panTro2-119 | Pan troglodytes | mml-miR-523a | 20/21 | chr19 | - | 50-70 | 59361158-59361236 | 0.994507 | Paralog | 3/4 | 4/20 |
22 | panTro2-119 | Pan troglodytes | ptr-miR-523 | 21/23 | chr19 | - | 49-71 | 59361158-59361236 | 0.996122 | Paralog | 3/4 | 4/20 |
23 | panTro2-120 | Pan troglodytes | ptr-miR-523 | 21/23 | chr19 | - | 47-69 | 59377931-59378007 | 0.997922 | Paralog | 3/4 | 4/20 |
24 | panTro2-121 | Pan troglodytes | ptr-miR-523 | 21/23 | chr19 | - | 49-71 | 59409403-59409481 | 0.991598 | Paralog | 3/4 | 4/20 |
25 | ptr-mir-523 | Pan troglodytes | ptr-miR-523 | 23/23 | chr19 | + | 45-67 | N/A | - | miRBase_13_0 | 3/4 | 4/20 |
Total | 25 record(s). |