- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bosTau4-180 | Bos taurus | hsa-miR-542-5p | 23/23 | chrUn.004.53 | - | 16-38 | 441554-441640 | 0.987178 | Ortholog | 5/16 | 1/16 |
2 | bosTau4-180 | Bos taurus | mmu-miR-542-5p | 22/22 | chrUn.004.53 | - | 13-34 | 441555-441638 | 0.959769 | Ortholog | 5/16 | 1/16 |
3 | bosTau4-180 | Bos taurus | mmu-miR-542-3p | 22/22 | chrUn.004.53 | - | 49-70 | 441557-441636 | 0.999366 | Ortholog | 5/16 | 1/16 |
4 | calJac1-374 | Callithrix jacchus | mmu-miR-542-3p | 22/22 | Contig3137 | + | 51-72 | 300453-300536 | 0.99847 | Ortholog | 5/16 | 1/16 |
5 | cfa-mir-542 | Canis familiaris | cfa-miR-542 | 22/22 | chrX | - | 38-59 | N/A | - | miRBase_13_0 | 5/16 | 1/16 |
6 | cavPor3-194 | Cavia porcellus | mmu-miR-542-3p | 22/22 | scaffold_128 | - | 49-70 | 2874148-2874227 | 0.997908 | Ortholog | 5/16 | 1/16 |
7 | cavPor3-194 | Cavia porcellus | hsa-miR-542-5p | 22/23 | scaffold_128 | - | 14-36 | 2874146-2874229 | 0.966935 | Ortholog | 5/16 | 1/16 |
8 | dasNov1-206 | Dasypus novemcinctus | hsa-miR-542-5p | 23/23 | scaffold_34664 | + | 14-36 | N/A | 0.992655 | Ortholog | 5/16 | 1/16 |
9 | dasNov1-206 | Dasypus novemcinctus | mmu-miR-542-3p | 22/22 | scaffold_34664 | + | 50-71 | N/A | 0.999313 | Ortholog | 5/16 | 1/16 |
10 | dasNov1-206 | Dasypus novemcinctus | mmu-miR-542-5p | 22/22 | scaffold_34664 | + | 10-31 | N/A | 0.969478 | Ortholog | 5/16 | 1/16 |
11 | echTel1-392 | Echinops telfari | mmu-miR-542-3p | 22/22 | scaffold_325038 | + | 51-72 | N/A | 0.992547 | Ortholog | 5/16 | 1/16 |
12 | equCab1-601 | Equus caballus | hsa-miR-542-5p | 23/23 | chrUn | + | 15-37 | 30497120-30497204 | 0.991765 | Ortholog | 5/16 | 1/16 |
13 | equCab1-601 | Equus caballus | mmu-miR-542-3p | 22/22 | chrUn | + | 51-72 | 30497121-30497204 | 0.999384 | Ortholog | 5/16 | 1/16 |
14 | equCab1-601 | Equus caballus | mmu-miR-542-5p | 22/22 | chrUn | + | 11-32 | 30497123-30497202 | 0.979621 | Ortholog | 5/16 | 1/16 |
15 | felCat3-400 | Felis catus | hsa-miR-542-5p | 23/23 | scaffold_217254 | - | 14-36 | 54539-54622 | 0.982805 | Ortholog | 5/16 | 1/16 |
16 | felCat3-400 | Felis catus | mmu-miR-542-5p | 22/22 | scaffold_217254 | - | 13-34 | 54539-54622 | 0.969946 | Ortholog | 5/16 | 1/16 |
17 | felCat3-400 | Felis catus | mmu-miR-542-3p | 22/22 | scaffold_217254 | - | 49-70 | 54541-54620 | 0.998575 | Ortholog | 5/16 | 1/16 |
18 | hsa-mir-542 | Homo sapiens | hsa-miR-542-5p | 23/23 | chrX | - | 16-38 | 133503037-133503133 | - | miRBase_13_0 | 5/16 | 1/16 |
19 | hsa-mir-542 | Homo sapiens | hsa-miR-542-3p | 22/22 | chrX | - | 53-74 | 133503037-133503133 | - | miRBase_13_0 | 5/16 | 1/16 |
20 | loxAfr1-100 | Loxodonta africana | mmu-miR-542-3p | 22/22 | scaffold_18374 | - | 49-70 | N/A | 0.99967 | Ortholog | 5/16 | 1/16 |
21 | loxAfr1-100 | Loxodonta africana | hsa-miR-542-5p | 23/23 | scaffold_18374 | - | 14-36 | N/A | 0.992886 | Ortholog | 5/16 | 1/16 |
22 | loxAfr1-100 | Loxodonta africana | mmu-miR-542-5p | 21/22 | scaffold_18374 | - | 14-34 | N/A | 0.993384 | Ortholog | 5/16 | 1/16 |
23 | mml-mir-542 | Macaca mulatta | mml-miR-542-5p | 23/23 | chrX | - | 16-38 | N/A | - | miRBase_13_0 | 5/16 | 1/16 |
24 | mml-mir-542 | Macaca mulatta | mml-miR-542-3p | 22/22 | chrX | - | 53-74 | N/A | - | miRBase_13_0 | 5/16 | 1/16 |
25 | mmu-mir-542 | Mus musculus | mmu-miR-542-5p | 22/22 | chrX | - | 14-35 | N/A | - | miRBase_13_0 | 5/16 | 1/16 |
26 | mmu-mir-542 | Mus musculus | mmu-miR-542-3p | 22/22 | chrX | - | 52-73 | N/A | - | miRBase_13_0 | 5/16 | 1/16 |
27 | oryCun1-280 | Oryctolagus cuniculus | hsa-miR-542-5p | 23/23 | scaffold_199169 | - | 14-36 | N/A | 0.985532 | Ortholog | 5/16 | 1/16 |
28 | oryCun1-280 | Oryctolagus cuniculus | mmu-miR-542-5p | 22/22 | scaffold_199169 | - | 13-34 | N/A | 0.951528 | Ortholog | 5/16 | 1/16 |
29 | oryCun1-280 | Oryctolagus cuniculus | mmu-miR-542-3p | 22/22 | scaffold_199169 | - | 49-70 | N/A | 0.999366 | Ortholog | 5/16 | 1/16 |
30 | otoGar1-235 | Otolemur garnettii | hsa-miR-542-5p | 22/23 | scaffold_118964.1-177386 | - | 14-35 | N/A | 0.983854 | Ortholog | 5/16 | 1/16 |
31 | otoGar1-235 | Otolemur garnettii | mmu-miR-542-3p | 22/22 | scaffold_118964.1-177386 | - | 49-70 | N/A | 0.999443 | Ortholog | 5/16 | 1/16 |
32 | otoGar1-235 | Otolemur garnettii | mmu-miR-542-5p | 22/22 | scaffold_118964.1-177386 | - | 13-34 | N/A | 0.968044 | Ortholog | 5/16 | 1/16 |
33 | ponAbe2-813 | Pongo abelii | mmu-miR-542-5p | 22/22 | chrX | - | 13-34 | 134000596-134000678 | 0.969865 | Ortholog | 5/16 | 1/16 |
34 | ponAbe2-813 | Pongo abelii | hsa-miR-542-5p | 23/23 | chrX | - | 14-36 | 134000596-134000678 | 0.990503 | Ortholog | 5/16 | 1/16 |
35 | ponAbe2-813 | Pongo abelii | mmu-miR-542-3p | 22/22 | chrX | - | 49-70 | 134000598-134000676 | 0.999476 | Ortholog | 5/16 | 1/16 |
36 | rno-mir-542 | Rattus norvegicus | rno-miR-542-5p | 22/22 | chrX | - | 11-32 | N/A | - | miRBase_13_0 | 5/16 | 1/16 |
37 | rno-mir-542 | Rattus norvegicus | rno-miR-542-3p | 22/22 | chrX | - | 49-70 | N/A | - | miRBase_13_0 | 5/16 | 1/16 |
Total | 37 record(s). |