- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-274 | Callithrix jacchus | rno-miR-543* | 21/21 | Contig2207 | - | 49-69 | 239265-239344 | 0.991681 | Ortholog | 6/15 | 1/16 |
2 | calJac1-274 | Callithrix jacchus | mmu-miR-543 | 22/22 | Contig2207 | - | 49-70 | 239265-239344 | 0.995037 | Ortholog | 6/15 | 1/16 |
3 | cavPor3-106 | Cavia porcellus | mmu-miR-543 | 22/22 | scaffold_111 | + | 51-72 | 1090476-1090561 | 0.968591 | Ortholog | 6/15 | 1/16 |
4 | cavPor3-106 | Cavia porcellus | rno-miR-543* | 21/21 | scaffold_111 | + | 51-71 | 1090476-1090561 | 0.949419 | Ortholog | 6/15 | 1/16 |
5 | cavPor3-106 | Cavia porcellus | rno-miR-543 | 20/22 | scaffold_111 | + | 17-38 | 1090475-1090560 | 0.882046 | Ortholog | 6/15 | 1/16 |
6 | dasNov1-278 | Dasypus novemcinctus | mmu-miR-543 | 22/22 | scaffold_5303 | - | 49-70 | N/A | 0.980946 | Ortholog | 6/15 | 1/16 |
7 | dasNov1-278 | Dasypus novemcinctus | rno-miR-543* | 21/21 | scaffold_5303 | - | 49-69 | N/A | 0.969009 | Ortholog | 6/15 | 1/16 |
8 | equCab1-338 | Equus caballus | mmu-miR-543 | 22/22 | chr24 | + | 51-72 | 42403323-42403405 | 0.994523 | Ortholog | 6/15 | 1/16 |
9 | equCab1-338 | Equus caballus | rno-miR-543* | 21/21 | chr24 | + | 51-71 | 42403323-42403405 | 0.990802 | Ortholog | 6/15 | 1/16 |
10 | loxAfr1-240 | Loxodonta africana | mmu-miR-543 | 22/22 | scaffold_44287 | - | 49-70 | N/A | 0.980946 | Ortholog | 6/15 | 1/16 |
11 | loxAfr1-240 | Loxodonta africana | rno-miR-543* | 21/21 | scaffold_44287 | - | 49-69 | N/A | 0.969009 | Ortholog | 6/15 | 1/16 |
12 | rheMac2-292 | Macaca mulatta | rno-miR-543* | 21/21 | chr7 | + | 51-71 | 164316907-164316990 | 0.954134 | Ortholog | 6/15 | 1/16 |
13 | rheMac2-292 | Macaca mulatta | mmu-miR-543 | 22/22 | chr7 | + | 51-72 | 164316907-164316990 | 0.971708 | Ortholog | 6/15 | 1/16 |
14 | otoGar1-158 | Otolemur garnettii | mmu-miR-543 | 22/22 | scaffold_116158.1-127804 | + | 51-72 | N/A | 0.995519 | Ortholog | 6/15 | 1/16 |
15 | otoGar1-158 | Otolemur garnettii | rno-miR-543* | 21/21 | scaffold_116158.1-127804 | + | 51-71 | N/A | 0.992434 | Ortholog | 6/15 | 1/16 |
16 | ponAbe2-212 | Pongo abelii | rno-miR-543* | 21/21 | chr14 | + | 51-71 | 102593432-102593515 | 0.975909 | Ortholog | 6/15 | 2/16 |
17 | ponAbe2-212 | Pongo abelii | mmu-miR-543 | 22/22 | chr14 | + | 51-72 | 102593432-102593515 | 0.985383 | Ortholog | 6/15 | 2/16 |
18 | ponAbe2-255 | Pongo abelii | rno-miR-543* | 21/21 | chr14_random | - | 49-69 | 813972-814051 | 0.969009 | Ortholog | 6/15 | 2/16 |
19 | ponAbe2-255 | Pongo abelii | mmu-miR-543 | 22/22 | chr14_random | - | 49-70 | 813972-814051 | 0.980946 | Ortholog | 6/15 | 2/16 |
20 | tupBel1-647 | Tupaia belangeri | mmu-miR-543 | 22/22 | scaffold_146327.1-70409 | + | 51-72 | N/A | 0.985383 | Ortholog | 6/15 | 1/16 |
21 | tupBel1-647 | Tupaia belangeri | rno-miR-543* | 21/21 | scaffold_146327.1-70409 | + | 51-71 | N/A | 0.975909 | Ortholog | 6/15 | 1/16 |
Total | 21 record(s). |