- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-626 | Callithrix jacchus | hsa-miR-556-5p | 20/22 | Contig726 | + | 12-31 | 552050-552129 | 0.999982 | Ortholog | 3/5 | 2/7 |
2 | calJac1-627 | Callithrix jacchus | mml-miR-556-5p | 20/22 | Contig726 | - | 14-34 | 552047-552130 | 0.999555 | Ortholog | 3/5 | 2/7 |
3 | hsa-mir-556 | Homo sapiens | hsa-miR-556-3p | 22/22 | chr1 | + | 55-76 | 160578960-160579054 | - | miRBase_13_0 | 3/5 | 1/7 |
4 | hsa-mir-556 | Homo sapiens | hsa-miR-556-5p | 22/22 | chr1 | + | 16-37 | 160578960-160579054 | - | miRBase_13_0 | 3/5 | 1/7 |
5 | mml-mir-556 | Macaca mulatta | mml-miR-556-3p | 22/22 | chr1 | + | 55-76 | N/A | - | miRBase_13_0 | 3/5 | 1/7 |
6 | mml-mir-556 | Macaca mulatta | mml-miR-556-5p | 22/22 | chr1 | + | 16-37 | N/A | - | miRBase_13_0 | 3/5 | 1/7 |
7 | ptr-mir-556 | Pan troglodytes | ptr-miR-556 | 22/22 | chr1 | + | 54-75 | N/A | - | miRBase_13_0 | 3/5 | 1/7 |
8 | ponAbe2-24 | Pongo abelii | hsa-miR-556-5p | 20/22 | chr1 | + | 13-33 | 89027937-89028018 | 0.999528 | Ortholog | 3/5 | 2/7 |
9 | ponAbe2-51 | Pongo abelii | mml-miR-556-3p | 21/22 | chr1 | - | 48-69 | 89027940-89028013 | 0.999865 | Ortholog | 3/5 | 2/7 |
10 | ponAbe2-51 | Pongo abelii | mml-miR-556-5p | 21/22 | chr1 | - | 16-37 | 89027934-89028020 | 0.99997 | Ortholog | 3/5 | 2/7 |
Total | 10 record(s). |