- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-133 | Callithrix jacchus | hsa-miR-559 | 21/21 | Contig16113 | + | 9-29 | 7627-7704 | 0.999847 | Ortholog | 2/4 | 2/8 |
2 | calJac1-134 | Callithrix jacchus | hsa-miR-559 | 21/21 | Contig16113 | - | 10-30 | 7625-7704 | 0.999846 | Ortholog | 2/4 | 2/8 |
3 | hg18-107 | Homo sapiens | hsa-miR-559 | 21/21 | chr2 | - | 11-31 | 47458322-47458402 | 0.999856 | Paralog | 2/4 | 2/8 |
4 | hsa-mir-559 | Homo sapiens | hsa-miR-559 | 21/21 | chr2 | + | 16-36 | 47458318-47458413 | - | miRBase_13_0 | 2/4 | 2/8 |
5 | panTro2-136 | Pan troglodytes | ptr-miR-559 | 21/21 | chr2a | - | 11-31 | 48514737-48514817 | 0.999822 | Paralog | 2/4 | 2/8 |
6 | ptr-mir-559 | Pan troglodytes | ptr-miR-559 | 21/21 | chr2a | + | 15-35 | N/A | - | miRBase_13_0 | 2/4 | 2/8 |
7 | ponAbe2-537 | Pongo abelii | hsa-miR-559 | 21/21 | chr2a | + | 10-30 | 63949189-63949267 | 0.997802 | Ortholog | 2/4 | 2/8 |
8 | ponAbe2-540 | Pongo abelii | hsa-miR-559 | 20/21 | chr2a | - | 11-31 | 63949187-63949267 | 0.999385 | Ortholog | 2/4 | 2/8 |
Total | 8 record(s). |