- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-346 | Callithrix jacchus | mml-miR-580 | 22/22 | Contig2712 | - | 49-70 | 164970-165048 | 0.999643 | Ortholog | 3/6 | 1/10 |
2 | hg18-134 | Homo sapiens | mml-miR-580 | 21/22 | chr5 | + | 51-71 | 36183758-36183836 | 0.999159 | Paralog | 3/6 | 2/10 |
3 | hsa-mir-580 | Homo sapiens | hsa-miR-580 | 22/22 | chr5 | - | 61-82 | 36183751-36183847 | - | miRBase_13_0 | 3/6 | 2/10 |
4 | mml-mir-580 | Macaca mulatta | mml-miR-580 | 22/22 | chr6 | - | 61-82 | N/A | - | miRBase_13_0 | 3/6 | 2/10 |
5 | rheMac2-265 | Macaca mulatta | mml-miR-580 | 21/22 | chr6 | + | 51-71 | 35940064-35940142 | 0.999987 | Paralog | 3/6 | 2/10 |
6 | oryCun1-292 | Oryctolagus cuniculus | hsa-miR-580 | 20/22 | scaffold_200276 | - | 35-54 | N/A | 0.933845 | Ortholog | 3/6 | 1/10 |
7 | panTro2-179 | Pan troglodytes | mml-miR-580 | 21/22 | chr5 | - | 50-70 | 79529304-79529380 | 0.999296 | Paralog | 3/6 | 2/10 |
8 | ptr-mir-580 | Pan troglodytes | ptr-miR-580 | 22/22 | chr5 | + | 60-81 | N/A | - | miRBase_13_0 | 3/6 | 2/10 |
9 | ponAbe2-613 | Pongo abelii | mml-miR-580 | 21/22 | chr5 | + | 51-71 | 37080734-37080812 | 0.999989 | Ortholog | 3/6 | 2/10 |
10 | ponAbe2-628 | Pongo abelii | mml-miR-580 | 22/22 | chr5 | - | 49-70 | 37080734-37080810 | 0.999993 | Ortholog | 3/6 | 2/10 |
Total | 10 record(s). |