- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-628 | Bos taurus | bta-miR-628 | 22/22 | chr10 | + | 23-44 | N/A | - | miRBase_13_0 | 5/14 | 1/14 |
2 | calJac1-102 | Callithrix jacchus | hsa-miR-628-5p | 22/22 | Contig1494 | + | 20-41 | 133574-133662 | 0.999713 | Ortholog | 5/14 | 1/14 |
3 | cfa-mir-628 | Canis familiaris | cfa-miR-628 | 22/22 | chr30 | - | 23-44 | N/A | - | miRBase_13_0 | 5/14 | 1/14 |
4 | dasNov1-328 | Dasypus novemcinctus | hsa-miR-628-5p | 22/22 | scaffold_6558 | - | 22-43 | N/A | 0.999707 | Ortholog | 5/14 | 1/14 |
5 | equCab1-16 | Equus caballus | hsa-miR-628-5p | 22/22 | chr1 | + | 17-38 | 132887785-132887869 | 0.99969 | Ortholog | 5/14 | 1/14 |
6 | equCab1-16 | Equus caballus | hsa-miR-628-3p | 21/21 | chr1 | + | 51-71 | 132887789-132887866 | 0.996451 | Ortholog | 5/14 | 1/14 |
7 | felCat3-119 | Felis catus | hsa-miR-628-3p | 21/21 | scaffold_148317 | - | 49-69 | 131898-131971 | 0.99234 | Ortholog | 5/14 | 1/14 |
8 | felCat3-119 | Felis catus | hsa-miR-628-5p | 22/22 | scaffold_148317 | - | 22-43 | 131890-131982 | 0.999529 | Ortholog | 5/14 | 1/14 |
9 | hsa-mir-628 | Homo sapiens | hsa-miR-628-3p | 21/21 | chr15 | - | 61-81 | 53452430-53452524 | - | miRBase_13_0 | 5/14 | 1/14 |
10 | hsa-mir-628 | Homo sapiens | hsa-miR-628-5p | 22/22 | chr15 | - | 23-44 | 53452430-53452524 | - | miRBase_13_0 | 5/14 | 1/14 |
11 | loxAfr1-390 | Loxodonta africana | hsa-miR-628-5p | 21/22 | scaffold_773 | + | 17-38 | N/A | 0.999093 | Ortholog | 5/14 | 1/14 |
12 | mml-mir-628 | Macaca mulatta | mml-miR-628-3p | 21/21 | chr7 | - | 61-81 | N/A | - | miRBase_13_0 | 5/14 | 1/14 |
13 | mml-mir-628 | Macaca mulatta | mml-miR-628-5p | 22/22 | chr7 | - | 23-44 | N/A | - | miRBase_13_0 | 5/14 | 1/14 |
14 | oryCun1-9 | Oryctolagus cuniculus | hsa-miR-628-5p | 20/22 | scaffold_111748 | - | 20-39 | N/A | 0.999724 | Ortholog | 5/14 | 1/14 |
15 | otoGar1-34 | Otolemur garnettii | hsa-miR-628-5p | 22/22 | scaffold_105769.1-24996 | - | 22-43 | N/A | 0.999529 | Ortholog | 5/14 | 1/14 |
16 | ptr-mir-628 | Pan troglodytes | ptr-miR-628 | 21/21 | chr15 | - | 61-81 | N/A | - | miRBase_13_0 | 5/14 | 1/14 |
17 | ponAbe2-269 | Pongo abelii | hsa-miR-628-3p | 21/21 | chr15 | - | 49-69 | 52160700-52160773 | 0.99234 | Ortholog | 5/14 | 1/14 |
18 | ponAbe2-269 | Pongo abelii | hsa-miR-628-5p | 22/22 | chr15 | - | 22-43 | 52160692-52160784 | 0.999529 | Ortholog | 5/14 | 1/14 |
19 | tupBel1-436 | Tupaia belangeri | hsa-miR-628-5p | 22/22 | scaffold_136167.1-65841 | - | 22-43 | N/A | 0.999613 | Ortholog | 5/14 | 1/14 |
Total | 19 record(s). |