- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-143 | Callithrix jacchus | mml-miR-643 | 21/22 | Contig16385 | + | 51-72 | 2839-2919 | 0.947455 | Ortholog | 3/6 | 2/10 |
2 | calJac1-80 | Callithrix jacchus | mml-miR-643 | 21/22 | Contig13872 | + | 51-72 | 34108-34188 | 0.947455 | Ortholog | 3/6 | 2/10 |
3 | equCab1-13 | Equus caballus | mml-miR-643 | 20/22 | chr1 | + | 51-72 | 89079228-89079326 | 0.977435 | Ortholog | 3/6 | 1/10 |
4 | hg18-97 | Homo sapiens | mml-miR-643 | 22/22 | chr19 | - | 49-70 | 57476873-57476949 | 0.999864 | Paralog | 3/6 | 2/10 |
5 | hsa-mir-643 | Homo sapiens | hsa-miR-643 | 22/22 | chr19 | + | 61-82 | 57476862-57476958 | - | miRBase_13_0 | 3/6 | 2/10 |
6 | mml-mir-643 | Macaca mulatta | mml-miR-643 | 22/22 | chr19 | + | 61-82 | N/A | - | miRBase_13_0 | 3/6 | 2/10 |
7 | rheMac2-181 | Macaca mulatta | mml-miR-643 | 21/22 | chr19 | - | 49-70 | 58324990-58325068 | 0.999909 | Paralog | 3/6 | 2/10 |
8 | panTro2-118 | Pan troglodytes | mml-miR-643 | 21/22 | chr19 | - | 50-70 | 57943816-57943894 | 0.999431 | Paralog | 3/6 | 2/10 |
9 | ptr-mir-643 | Pan troglodytes | ptr-miR-643 | 22/22 | chr19 | + | 60-81 | N/A | - | miRBase_13_0 | 3/6 | 2/10 |
10 | ponAbe2-439 | Pongo abelii | mml-miR-643 | 21/22 | chr19 | - | 49-70 | 53770007-53770098 | 0.999257 | Ortholog | 3/6 | 1/10 |
Total | 10 record(s). |