- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-238 | Callithrix jacchus | hsa-miR-664* | 24/24 | Contig20805 | - | 16-39 | 6716-6802 | 0.976665 | Ortholog | 5/9 | 3/13 |
2 | calJac1-359 | Callithrix jacchus | hsa-miR-664* | 24/24 | Contig28906 | - | 16-39 | 4011-4097 | 0.976665 | Ortholog | 5/9 | 3/13 |
3 | calJac1-53 | Callithrix jacchus | hsa-miR-664* | 22/24 | Contig1251 | - | 33-54 | 20232-20335 | 0.978361 | Ortholog | 5/9 | 3/13 |
4 | cfa-mir-664 | Canis familiaris | cfa-miR-664 | 22/22 | chr38 | - | 1-22 | N/A | - | miRBase_13_0 | 5/9 | 1/13 |
5 | cavPor3-202 | Cavia porcellus | hsa-miR-664 | 21/23 | scaffold_13 | + | 47-69 | 20569883-20569956 | 0.997709 | Ortholog | 5/9 | 2/13 |
6 | cavPor3-366 | Cavia porcellus | hsa-miR-664* | 24/24 | scaffold_23 | + | 25-48 | 19417470-19417564 | 0.93613 | Ortholog | 5/9 | 2/13 |
7 | hsa-mir-664 | Homo sapiens | hsa-miR-664* | 24/24 | chr1 | - | 11-34 | 218440503-218440584 | - | miRBase_13_0 | 5/9 | 1/13 |
8 | hsa-mir-664 | Homo sapiens | hsa-miR-664 | 23/23 | chr1 | - | 49-71 | 218440503-218440584 | - | miRBase_13_0 | 5/9 | 1/13 |
9 | loxAfr1-292 | Loxodonta africana | hsa-miR-664* | 22/24 | scaffold_53154 | - | 13-36 | N/A | 0.832653 | Ortholog | 5/9 | 1/13 |
10 | mml-mir-664 | Macaca mulatta | mml-miR-664 | 21/21 | chr1 | + | 38-58 | N/A | - | miRBase_13_0 | 5/9 | 1/13 |
11 | mm9-24 | Mus musculus | rno-miR-664 | 22/22 | chr1 | + | 46-67 | 187066846-187066918 | 0.998677 | Ortholog | 5/9 | 1/13 |
12 | ptr-mir-664 | Pan troglodytes | ptr-miR-664 | 23/23 | chr1 | - | 49-71 | N/A | - | miRBase_13_0 | 5/9 | 1/13 |
13 | rno-mir-664-1 | Rattus norvegicus | rno-miR-664 | 22/22 | chr18 | + | 38-59 | N/A | - | miRBase_13_0 | 5/9 | 2/13 |
14 | rno-mir-664-2 | Rattus norvegicus | rno-miR-664 | 22/22 | chr13 | + | 38-59 | N/A | - | miRBase_13_0 | 5/9 | 2/13 |
Total | 14 record(s). |