- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-452 | Callithrix jacchus | mmu-miR-669n | 20/20 | Contig411 | + | 52-71 | 205126-205235 | 0.856708 | Ortholog | 1/23 | 1/87 |
2 | canFam2-110 | Canis familiaris | mmu-miR-669o | 21/23 | chr2 | + | 20-42 | 29992574-29992662 | 0.929082 | Ortholog | 1/23 | 2/87 |
3 | canFam2-234 | Canis familiaris | mmu-miR-669a | 20/22 | chr4 | - | 22-43 | 54293281-54293373 | 0.939156 | Ortholog | 1/23 | 2/87 |
4 | cavPor3-513 | Cavia porcellus | mmu-miR-669a | 20/22 | scaffold_4 | + | 51-72 | 6012927-6013008 | 0.999604 | Ortholog | 1/23 | 1/87 |
5 | danRer5-104 | Danio rerio | mmu-miR-669o | 21/23 | chr20 | - | 35-56 | 42483488-42483587 | 0.882003 | Ortholog | 1/23 | 1/87 |
6 | dasNov1-302 | Dasypus novemcinctus | mmu-miR-669o | 21/23 | scaffold_56090 | - | 28-50 | N/A | 0.885366 | Ortholog | 1/23 | 3/87 |
7 | dasNov1-382 | Dasypus novemcinctus | mmu-miR-669o | 21/23 | scaffold_9700 | - | 48-70 | N/A | 0.814749 | Ortholog | 1/23 | 3/87 |
8 | dasNov1-46 | Dasypus novemcinctus | mmu-miR-669o | 21/23 | scaffold_15115 | + | 29-51 | N/A | 0.994903 | Ortholog | 1/23 | 3/87 |
9 | droWil1-150 | Drosophila willistoni | mmu-miR-669a | 20/22 | scaffold_181089 | - | 18-39 | N/A | 0.803926 | Ortholog | 1/23 | 1/87 |
10 | droWil1-150 | Drosophila willistoni | mmu-miR-669o | 22/23 | scaffold_181089 | - | 17-39 | N/A | 0.817669 | Ortholog | 1/23 | 1/87 |
11 | echTel1-174 | Echinops telfari | mmu-miR-669n | 20/20 | scaffold_285488 | + | 34-53 | N/A | 0.921401 | Ortholog | 1/23 | 2/87 |
12 | echTel1-67 | Echinops telfari | mmu-miR-669o | 21/23 | scaffold_21946 | - | 43-65 | N/A | 0.882295 | Ortholog | 1/23 | 2/87 |
13 | equCab1-167 | Equus caballus | mmu-miR-669o | 21/23 | chr16 | - | 45-67 | 39969238-39969346 | 0.857752 | Ortholog | 1/23 | 4/87 |
14 | equCab1-227 | Equus caballus | mmu-miR-669o | 21/23 | chr2 | + | 48-70 | 26777640-26777738 | 0.972139 | Ortholog | 1/23 | 4/87 |
15 | equCab1-23 | Equus caballus | mmu-miR-669a | 20/22 | chr1 | - | 50-70 | 49617278-49617354 | 0.926454 | Ortholog | 1/23 | 4/87 |
16 | equCab1-470 | Equus caballus | mmu-miR-669o | 21/23 | chr4 | - | 28-50 | 38893770-38893868 | 0.971689 | Ortholog | 1/23 | 4/87 |
17 | eriEur1-99 | Erinaceus europaeus | mmu-miR-669a | 20/22 | scaffold_299029 | + | 33-53 | N/A | 0.943708 | Ortholog | 1/23 | 1/87 |
18 | galGal3-78 | Gallus gallus | mmu-miR-669n | 20/20 | chr6 | + | 29-48 | 22295009-22295105 | 0.920335 | Ortholog | 1/23 | 1/87 |
19 | loxAfr1-301 | Loxodonta africana | mmu-miR-669n | 20/20 | scaffold_5502 | - | 50-69 | N/A | 0.901015 | Ortholog | 1/23 | 2/87 |
20 | loxAfr1-398 | Loxodonta africana | mmu-miR-669o | 21/23 | scaffold_82364 | + | 31-53 | N/A | 0.849139 | Ortholog | 1/23 | 2/87 |
21 | rheMac2-245 | Macaca mulatta | mmu-miR-669o | 21/23 | chr4 | - | 49-71 | 99279455-99279528 | 0.992796 | Ortholog | 1/23 | 2/87 |
22 | rheMac2-72 | Macaca mulatta | mmu-miR-669a | 20/22 | chr13 | + | 45-66 | 31015185-31015265 | 0.970748 | Ortholog | 1/23 | 2/87 |
23 | monDom4-143 | Monodelphis domestica | mmu-miR-669o | 21/23 | chr2 | + | 19-41 | 374365672-374365760 | 0.974215 | Ortholog | 1/23 | 2/87 |
24 | monDom4-436 | Monodelphis domestica | mmu-miR-669o | 21/23 | chr8 | + | 6-28 | 198388578-198388653 | 0.98078 | Ortholog | 1/23 | 2/87 |
25 | ornAna1-82 | Ornithorhynchus anatinus | mmu-miR-669n | 20/20 | Contig15824 | - | 50-69 | 2954-3041 | 0.860027 | Ortholog | 1/23 | 1/87 |
26 | oryCun1-102 | Oryctolagus cuniculus | mmu-miR-669h-3p | 20/22 | scaffold_162394 | - | 49-69 | N/A | 0.97855 | Ortholog | 1/23 | 6/87 |
27 | oryCun1-148 | Oryctolagus cuniculus | mmu-miR-669c | 21/22 | scaffold_173275 | + | 35-56 | N/A | 0.903237 | Ortholog | 1/23 | 6/87 |
28 | oryCun1-15 | Oryctolagus cuniculus | mmu-miR-669l | 20/22 | scaffold_117808 | - | 49-69 | N/A | 0.934924 | Ortholog | 1/23 | 6/87 |
29 | oryCun1-160 | Oryctolagus cuniculus | mmu-miR-669n | 19/20 | scaffold_175580 | - | 26-44 | N/A | 0.929781 | Ortholog | 1/23 | 6/87 |
30 | oryCun1-521 | Oryctolagus cuniculus | mmu-miR-669n | 19/20 | scaffold_215417 | - | 40-58 | N/A | 0.959971 | Ortholog | 1/23 | 6/87 |
31 | oryCun1-91 | Oryctolagus cuniculus | mmu-miR-669d | 21/22 | scaffold_156192 | + | 48-69 | N/A | 0.929819 | Ortholog | 1/23 | 6/87 |
32 | oryLat2-422 | Oryzias latipes | mmu-miR-669n | 18/20 | chr9 | - | 10-28 | 32460374-32460446 | 0.843847 | Ortholog | 1/23 | 2/87 |
33 | oryLat2-94 | Oryzias latipes | mmu-miR-669n | 18/20 | chr13 | - | 34-52 | 23509212-23509310 | 0.976523 | Ortholog | 1/23 | 2/87 |
34 | otoGar1-132 | Otolemur garnettii | mmu-miR-669a | 20/22 | scaffold_115130.1-225337 | - | 32-52 | N/A | 0.994482 | Ortholog | 1/23 | 2/87 |
35 | otoGar1-443 | Otolemur garnettii | mmu-miR-669o | 21/23 | scaffold_90973.1-290387 | - | 49-71 | N/A | 0.914027 | Ortholog | 1/23 | 2/87 |
36 | panTro2-156 | Pan troglodytes | mmu-miR-669o | 21/23 | chr3 | - | 45-67 | 50030342-50030433 | 0.902372 | Ortholog | 1/23 | 2/87 |
37 | panTro2-22 | Pan troglodytes | mmu-miR-669o | 21/23 | chr10 | + | 16-38 | 89470001-89470086 | 0.87579 | Ortholog | 1/23 | 2/87 |
38 | ponAbe2-662 | Pongo abelii | mmu-miR-669o | 21/23 | chr6 | - | 44-66 | 105014033-105014100 | 0.990279 | Ortholog | 1/23 | 2/87 |
39 | ponAbe2-76 | Pongo abelii | mmu-miR-669o | 21/23 | chr10 | + | 48-70 | 87890534-87890613 | 0.805385 | Ortholog | 1/23 | 2/87 |
40 | rn4-126 | Rattus norvegicus | mmu-miR-669o | 21/23 | chr16 | + | 50-72 | 46213089-46213160 | 0.952619 | Ortholog | 1/23 | 5/87 |
41 | rn4-135 | Rattus norvegicus | mmu-miR-669a | 20/22 | chr17 | + | 21-42 | 51521390-51521478 | 0.843153 | Ortholog | 1/23 | 5/87 |
42 | rn4-180 | Rattus norvegicus | mmu-miR-669a | 21/22 | chr2 | + | 33-54 | 180734796-180734897 | 0.984974 | Ortholog | 1/23 | 5/87 |
43 | rn4-347 | Rattus norvegicus | mmu-miR-669o | 21/23 | chrUn_random | - | 49-71 | 1838721-1838821 | 0.816605 | Ortholog | 1/23 | 5/87 |
44 | rn4-352 | Rattus norvegicus | mmu-miR-669a | 20/22 | chrX | + | 35-55 | 50697852-50697919 | 0.943912 | Ortholog | 1/23 | 5/87 |
45 | tetNig1-115 | Tetraodon nigroviridis | mmu-miR-669a | 20/22 | chr2 | - | 48-69 | 7414962-7415036 | 0.981279 | Ortholog | 1/23 | 2/87 |
46 | tetNig1-153 | Tetraodon nigroviridis | mmu-miR-669o | 21/23 | chr5 | + | 50-72 | 3131766-3131865 | 0.833677 | Ortholog | 1/23 | 2/87 |
47 | tupBel1-265 | Tupaia belangeri | mmu-miR-669o | 21/23 | scaffold_125836.1-595616 | + | 50-72 | N/A | 0.984873 | Ortholog | 1/23 | 2/87 |
48 | tupBel1-388 | Tupaia belangeri | mmu-miR-669n | 20/20 | scaffold_133170.1-293826 | - | 50-69 | N/A | 0.958613 | Ortholog | 1/23 | 2/87 |
Total | 48 record(s). |