- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-659 | Callithrix jacchus | mmu-miR-672 | 21/23 | Contig9186 | - | 15-37 | 50967-51052 | 0.930781 | Ortholog | 3/13 | 1/16 |
2 | cavPor3-396 | Cavia porcellus | cin-miR-672 | 20/22 | scaffold_26 | + | 42-62 | 21954877-21954986 | 0.820798 | Ortholog | 3/13 | 1/16 |
3 | cin-mir-672 | Ciona intestinalis | cin-miR-672 | 22/22 | N/A | N/A | 16-37 | N/A | - | miRBase_13_0 | 3/13 | 1/16 |
4 | echTel1-13 | Echinops telfari | mmu-miR-672 | 23/23 | scaffold_144896 | - | 17-39 | N/A | 0.998107 | Ortholog | 3/13 | 1/16 |
5 | echTel1-13 | Echinops telfari | cin-miR-672 | 20/22 | scaffold_144896 | - | 13-33 | N/A | 0.997705 | Ortholog | 3/13 | 1/16 |
6 | equCab1-723 | Equus caballus | mmu-miR-672 | 23/23 | chrUn | - | 17-39 | 223100205-223100292 | 0.939773 | Ortholog | 3/13 | 1/16 |
7 | equCab1-723 | Equus caballus | cin-miR-672 | 20/22 | chrUn | - | 13-33 | 223100206-223100288 | 0.939826 | Ortholog | 3/13 | 1/16 |
8 | eriEur1-183 | Erinaceus europaeus | cin-miR-672 | 21/22 | scaffold_353193 | - | 25-46 | N/A | 0.815816 | Ortholog | 3/13 | 2/16 |
9 | eriEur1-304 | Erinaceus europaeus | cin-miR-672 | 20/22 | scaffold_374838 | - | 15-35 | N/A | 0.927679 | Ortholog | 3/13 | 2/16 |
10 | mm9-425 | Mus musculus | cin-miR-672 | 20/22 | chr6 | + | 48-69 | 99273095-99273181 | 0.942473 | Paralog | 3/13 | 2/16 |
11 | mmu-mir-672 | Mus musculus | mmu-miR-672 | 23/23 | chrX | - | 25-47 | N/A | - | miRBase_13_0 | 3/13 | 2/16 |
12 | oryCun1-341 | Oryctolagus cuniculus | cin-miR-672 | 20/22 | scaffold_203730 | - | 13-33 | N/A | 0.997705 | Ortholog | 3/13 | 1/16 |
13 | oryCun1-341 | Oryctolagus cuniculus | mmu-miR-672 | 23/23 | scaffold_203730 | - | 17-39 | N/A | 0.998107 | Ortholog | 3/13 | 1/16 |
14 | otoGar1-361 | Otolemur garnettii | mmu-miR-672 | 22/23 | scaffold_82722.1-180754 | - | 14-36 | N/A | 0.998284 | Ortholog | 3/13 | 1/16 |
15 | ponAbe2-797 | Pongo abelii | mmu-miR-672 | 21/23 | chrX | - | 15-37 | 72267602-72267687 | 0.998875 | Ortholog | 3/13 | 1/16 |
16 | rno-mir-672 | Rattus norvegicus | rno-miR-672 | 23/23 | chrX | - | 11-33 | N/A | - | miRBase_13_0 | 3/13 | 1/16 |
17 | taeGut1-321 | Taeniopygia guttata | cin-miR-672 | 20/22 | chr9 | + | 14-35 | 17559390-17559472 | 0.892987 | Ortholog | 3/13 | 2/16 |
18 | taeGut1-371 | Taeniopygia guttata | cin-miR-672 | 20/22 | chrUn | - | 15-36 | 172025012-172025096 | 0.825162 | Ortholog | 3/13 | 2/16 |
19 | tupBel1-1558 | Tupaia belangeri | cin-miR-672 | 20/22 | scaffold_59371.1-756 | + | 15-35 | N/A | 0.998228 | Ortholog | 3/13 | 1/16 |
20 | tupBel1-1558 | Tupaia belangeri | mmu-miR-672 | 23/23 | scaffold_59371.1-756 | + | 13-35 | N/A | 0.998285 | Ortholog | 3/13 | 1/16 |
Total | 20 record(s). |