- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ame-mir-71 | Apis mellifera | ame-miR-71 | 19/19 | Group1.1 | - | 25-43 | N/A | - | miRBase_13_0 | 13/17 | 2/25 |
2 | apiMel2-7 | Apis mellifera | spu-miR-71 | 22/23 | Group1 | - | 14-35 | 103044-103128 | 0.999801 | Paralog | 13/17 | 2/25 |
3 | apiMel2-7 | Apis mellifera | lgi-miR-71 | 22/23 | Group1 | - | 14-36 | 103044-103128 | 0.999642 | Paralog | 13/17 | 2/25 |
4 | apiMel2-7 | Apis mellifera | ame-miR-71 | 19/19 | Group1 | - | 12-30 | 103046-103126 | 0.999533 | Paralog | 13/17 | 2/25 |
5 | bmo-mir-71 | Bombyx mori | bmo-miR-71 | 19/19 | nscaf1690 | - | 21-39 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
6 | bfl-mir-71 | Branchiostoma floridae | bfl-miR-71 | 22/22 | Bf_V2_187 | - | 22-43 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
7 | caePb2-29 | Caenorhabditis brenneri | cel-miR-71 | 19/19 | chrUn | + | 15-33 | 140296036-140296119 | 0.998431 | Ortholog | 13/17 | 2/25 |
8 | caePb2-29 | Caenorhabditis brenneri | spu-miR-71 | 21/23 | chrUn | + | 15-35 | 140296037-140296120 | 0.9977 | Ortholog | 13/17 | 2/25 |
9 | caePb2-7 | Caenorhabditis brenneri | spu-miR-71 | 21/23 | chrUn | + | 15-35 | 28719730-28719813 | 0.9977 | Ortholog | 13/17 | 2/25 |
10 | caePb2-7 | Caenorhabditis brenneri | cel-miR-71 | 19/19 | chrUn | + | 14-32 | 28719731-28719812 | 0.998569 | Ortholog | 13/17 | 2/25 |
11 | cb3-6 | Caenorhabditis briggsae | spu-miR-71 | 21/23 | chrI | - | 10-30 | 2252472-2252546 | 0.998074 | Paralog | 13/17 | 2/25 |
12 | cb3-6 | Caenorhabditis briggsae | cbr-miR-71 | 19/19 | chrI | - | 10-28 | 2252472-2252546 | 0.998711 | Paralog | 13/17 | 2/25 |
13 | cbr-mir-71 | Caenorhabditis briggsae | cbr-miR-71 | 19/19 | cb25.fpc4321 | - | 11-29 | N/A | - | miRBase_13_0 | 13/17 | 2/25 |
14 | cel-mir-71 | Caenorhabditis elegans | cel-miR-71 | 19/19 | chrI | - | 16-34 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
15 | caeJap1-30 | Caenorhabditis japonica | cel-miR-71 | 19/19 | chrUn | + | 12-30 | 134164466-134164545 | 0.999125 | Ortholog | 13/17 | 1/25 |
16 | caeJap1-30 | Caenorhabditis japonica | spu-miR-71 | 21/23 | chrUn | + | 14-34 | 134164464-134164546 | 0.998654 | Ortholog | 13/17 | 1/25 |
17 | caeRem3-57 | Caenorhabditis remanei | spu-miR-71 | 21/23 | chrUn | - | 14-34 | 83434609-83434691 | 0.996922 | Ortholog | 13/17 | 1/25 |
18 | caeRem3-57 | Caenorhabditis remanei | cel-miR-71 | 19/19 | chrUn | - | 14-32 | 83434609-83434691 | 0.997896 | Ortholog | 13/17 | 1/25 |
19 | cap-mir-71 | Capitella sp. | cap-miR-71 | 23/23 | scaffold_933 | + | 22-44 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
20 | gasAcu1-625 | Gasterosteus aculeatus | sja-miR-71 | 19/21 | chrXVII | + | 11-31 | 7462820-7462895 | 0.994338 | Ortholog | 13/17 | 1/25 |
21 | lgi-mir-71 | Lottia gigantea | lgi-miR-71 | 23/23 | sca_2 | - | 22-44 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
22 | sko-mir-71 | Saccoglossus kowalevskii | sko-miR-71 | 22/22 | N/A | N/A | 22-43 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
23 | sja-mir-71 | Schistosoma japonicum | sja-miR-71 | 21/21 | N/A | N/A | 16-36 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
24 | sma-mir-71 | Schistosoma mansoni | sma-miR-71 | 21/21 | N/A | N/A | 17-37 | N/A | - | miRBase_13_0 | 13/17 | 1/25 |
25 | sme-mir-71a-1 | Schmidtea mediterranea | sme-miR-71a | 22/22 | Contig3375.4 | + | 17-38 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
26 | sme-mir-71a-2 | Schmidtea mediterranea | sme-miR-71a | 22/22 | Contig11992.1 | + | 12-33 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
27 | sme-mir-71b | Schmidtea mediterranea | sme-miR-71b | 22/22 | Contig65.1 | - | 16-37 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
28 | sme-mir-71b | Schmidtea mediterranea | sme-miR-71b* | 20/20 | Contig65.1 | - | 61-80 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
29 | sme-mir-71c | Schmidtea mediterranea | sme-miR-71c | 22/22 | Contig2221.1 | - | 11-32 | N/A | - | miRBase_13_0 | 13/17 | 4/25 |
30 | spu-mir-71 | Strongylocentrotus purpuratus | spu-miR-71 | 23/23 | N/A | N/A | 22-44 | N/A | - | miRBase_13_0 | 13/17 | 2/25 |
31 | strPur2-15 | Strongylocentrotus purpuratus | spu-miR-71 | 23/23 | Scaffold1649 | + | 12-34 | 146351-146432 | 0.983389 | Paralog | 13/17 | 2/25 |
32 | strPur2-15 | Strongylocentrotus purpuratus | sko-miR-71 | 20/22 | Scaffold1649 | + | 11-32 | 146352-146431 | 0.973521 | Paralog | 13/17 | 2/25 |
33 | strPur2-15 | Strongylocentrotus purpuratus | cel-miR-71 | 19/19 | Scaffold1649 | + | 10-28 | 146353-146430 | 0.951007 | Paralog | 13/17 | 2/25 |
34 | tca-mir-71 | Tribolium castaneum | tca-miR-71 | 22/22 | CM000278.1 | + | 10-31 | N/A | - | miRBase_13_0 | 13/17 | 2/25 |
35 | triCas2-11 | Tribolium castaneum | spu-miR-71 | 22/23 | ChLG3 | + | 10-31 | N/A | 0.993162 | Paralog | 13/17 | 2/25 |
36 | triCas2-11 | Tribolium castaneum | lgi-miR-71 | 22/23 | ChLG3 | + | 11-33 | N/A | 0.990701 | Paralog | 13/17 | 2/25 |
37 | triCas2-11 | Tribolium castaneum | cel-miR-71 | 19/19 | ChLG3 | + | 9-27 | N/A | 0.987958 | Paralog | 13/17 | 2/25 |
Total | 37 record(s). |