- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | aga-mir-87 | Anopheles gambiae | aga-miR-87 | 21/21 | chrX | - | 56-76 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
2 | anoGam1-291 | Anopheles gambiae | cbr-miR-87 | 18/20 | chrX | - | 50-69 | 261188-261263 | 0.998935 | Paralog | 21/27 | 2/39 |
3 | anoGam1-291 | Anopheles gambiae | aga-miR-87 | 21/21 | chrX | - | 50-70 | 261187-261264 | 0.99763 | Paralog | 21/27 | 2/39 |
4 | anoGam1-291 | Anopheles gambiae | bmo-miR-87 | 19/21 | chrX | - | 50-70 | 261190-261262 | 0.998953 | Paralog | 21/27 | 2/39 |
5 | anoGam1-291 | Anopheles gambiae | tca-miR-87 | 19/21 | chrX | - | 50-70 | 261188-261263 | 0.998736 | Paralog | 21/27 | 2/39 |
6 | ame-mir-87-1 | Apis mellifera | ame-miR-87 | 20/20 | Group13.15 | - | 70-89 | N/A | - | miRBase_13_0 | 21/27 | 3/39 |
7 | ame-mir-87-2 | Apis mellifera | ame-miR-87 | 20/20 | Group13.15 | - | 70-89 | N/A | - | miRBase_13_0 | 21/27 | 3/39 |
8 | apiMel2-34 | Apis mellifera | ame-miR-87 | 20/20 | Group13 | - | 50-69 | 7332109-7332182 | 0.999832 | Paralog | 21/27 | 3/39 |
9 | apiMel2-34 | Apis mellifera | dme-miR-87 | 19/21 | Group13 | - | 50-69 | 7332110-7332181 | 0.999691 | Paralog | 21/27 | 3/39 |
10 | apiMel2-34 | Apis mellifera | sme-miR-87a | 18/20 | Group13 | - | 51-69 | 7332109-7332182 | 0.999903 | Paralog | 21/27 | 3/39 |
11 | apiMel2-34 | Apis mellifera | aga-miR-87 | 19/21 | Group13 | - | 50-70 | 7332108-7332183 | 0.999727 | Paralog | 21/27 | 3/39 |
12 | apiMel2-34 | Apis mellifera | bmo-miR-87 | 20/21 | Group13 | - | 50-70 | 7332110-7332181 | 0.999734 | Paralog | 21/27 | 3/39 |
13 | apiMel2-34 | Apis mellifera | tca-miR-87 | 21/21 | Group13 | - | 50-70 | 7332109-7332182 | 0.999558 | Paralog | 21/27 | 3/39 |
14 | bmo-mir-87 | Bombyx mori | bmo-miR-87 | 21/21 | nscaf2800 | + | 62-82 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
15 | caePb2-17 | Caenorhabditis brenneri | cbr-miR-87 | 20/20 | chrUn | + | 52-71 | 83992872-83992949 | 0.996479 | Ortholog | 21/27 | 2/39 |
16 | caePb2-17 | Caenorhabditis brenneri | aga-miR-87 | 19/21 | chrUn | + | 51-71 | 83992872-83992949 | 0.994678 | Ortholog | 21/27 | 2/39 |
17 | caePb2-17 | Caenorhabditis brenneri | bmo-miR-87 | 19/21 | chrUn | + | 52-71 | 83992873-83992948 | 0.996181 | Ortholog | 21/27 | 2/39 |
18 | caePb2-17 | Caenorhabditis brenneri | tca-miR-87 | 21/21 | chrUn | + | 51-71 | 83992873-83992948 | 0.994407 | Ortholog | 21/27 | 2/39 |
19 | caePb2-17 | Caenorhabditis brenneri | cel-miR-87 | 22/22 | chrUn | + | 51-72 | 83992873-83992948 | 0.987284 | Ortholog | 21/27 | 2/39 |
20 | caePb2-17 | Caenorhabditis brenneri | sme-miR-87a | 18/20 | chrUn | + | 52-70 | 83992873-83992948 | 0.997718 | Ortholog | 21/27 | 2/39 |
21 | caePb2-78 | Caenorhabditis brenneri | aga-miR-87 | 19/21 | chrUn | - | 50-70 | 175577638-175577713 | 0.996037 | Ortholog | 21/27 | 2/39 |
22 | cb3-45 | Caenorhabditis briggsae | sme-miR-87a | 18/20 | chrV | + | 20-38 | 6389738-6389825 | 0.98964 | Paralog | 21/27 | 2/39 |
23 | cb3-45 | Caenorhabditis briggsae | aga-miR-87 | 19/21 | chrV | + | 17-37 | 6389739-6389824 | 0.983255 | Paralog | 21/27 | 2/39 |
24 | cb3-45 | Caenorhabditis briggsae | bmo-miR-87 | 19/21 | chrV | + | 20-39 | 6389738-6389825 | 0.983287 | Paralog | 21/27 | 2/39 |
25 | cb3-45 | Caenorhabditis briggsae | tca-miR-87 | 21/21 | chrV | + | 19-39 | 6389738-6389825 | 0.972955 | Paralog | 21/27 | 2/39 |
26 | cb3-45 | Caenorhabditis briggsae | cbr-miR-87 | 20/20 | chrV | + | 18-37 | 6389739-6389824 | 0.989245 | Paralog | 21/27 | 2/39 |
27 | cb3-45 | Caenorhabditis briggsae | cel-miR-87 | 22/22 | chrV | + | 19-40 | 6389738-6389825 | 0.949709 | Paralog | 21/27 | 2/39 |
28 | cbr-mir-87 | Caenorhabditis briggsae | cbr-miR-87 | 20/20 | cb25.fpc4470 | - | 61-80 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
29 | cel-mir-87 | Caenorhabditis elegans | cel-miR-87 | 22/22 | chrV | - | 61-82 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
30 | caeJap1-9 | Caenorhabditis japonica | bmo-miR-87 | 19/21 | chrUn | + | 51-70 | 17231998-17232073 | 0.998798 | Ortholog | 21/27 | 1/39 |
31 | caeJap1-9 | Caenorhabditis japonica | aga-miR-87 | 19/21 | chrUn | + | 49-69 | 17231998-17232073 | 0.998136 | Ortholog | 21/27 | 1/39 |
32 | caeJap1-9 | Caenorhabditis japonica | sme-miR-87a | 18/20 | chrUn | + | 51-69 | 17231998-17232073 | 0.999199 | Ortholog | 21/27 | 1/39 |
33 | caeJap1-9 | Caenorhabditis japonica | tca-miR-87 | 21/21 | chrUn | + | 50-70 | 17231998-17232073 | 0.998136 | Ortholog | 21/27 | 1/39 |
34 | caeJap1-9 | Caenorhabditis japonica | cel-miR-87 | 22/22 | chrUn | + | 50-71 | 17231998-17232073 | 0.996794 | Ortholog | 21/27 | 1/39 |
35 | caeJap1-9 | Caenorhabditis japonica | cbr-miR-87 | 20/20 | chrUn | + | 50-69 | 17231998-17232073 | 0.998798 | Ortholog | 21/27 | 1/39 |
36 | caeRem3-65 | Caenorhabditis remanei | tca-miR-87 | 21/21 | chrUn | - | 50-70 | 126942582-126942654 | 0.996114 | Ortholog | 21/27 | 1/39 |
37 | caeRem3-65 | Caenorhabditis remanei | cbr-miR-87 | 20/20 | chrUn | - | 50-69 | 126942582-126942654 | 0.997113 | Ortholog | 21/27 | 1/39 |
38 | caeRem3-65 | Caenorhabditis remanei | bmo-miR-87 | 19/21 | chrUn | - | 50-69 | 126942583-126942653 | 0.997553 | Ortholog | 21/27 | 1/39 |
39 | caeRem3-65 | Caenorhabditis remanei | cel-miR-87 | 22/22 | chrUn | - | 49-70 | 126942583-126942653 | 0.993327 | Ortholog | 21/27 | 1/39 |
40 | caeRem3-65 | Caenorhabditis remanei | sme-miR-87a | 18/20 | chrUn | - | 51-69 | 126942582-126942654 | 0.997767 | Ortholog | 21/27 | 1/39 |
41 | caeRem3-65 | Caenorhabditis remanei | aga-miR-87 | 19/21 | chrUn | - | 50-70 | 126942581-126942655 | 0.99623 | Ortholog | 21/27 | 1/39 |
42 | cap-mir-87a | Capitella sp. | cap-miR-87a | 22/22 | scaffold_222 | - | 61-82 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
43 | cap-mir-87b | Capitella sp. | cap-miR-87b | 22/22 | scaffold_222 | - | 61-82 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
44 | dan-mir-87 | Drosophila ananassae | dan-miR-87 | 21/21 | N/A | N/A | 59-79 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
45 | droAna3-139 | Drosophila ananassae | cbr-miR-87 | 18/20 | scaffold_13340 | + | 27-46 | N/A | 0.94831 | Paralog | 21/27 | 2/39 |
46 | der-mir-87 | Drosophila erecta | der-miR-87 | 21/21 | N/A | N/A | 59-79 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
47 | dgr-mir-87 | Drosophila grimshawi | dgr-miR-87 | 21/21 | N/A | N/A | 60-80 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
48 | dme-mir-87 | Drosophila melanogaster | dme-miR-87 | 21/21 | chr2L | - | 61-81 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
49 | dmo-mir-87 | Drosophila mojavensis | dmo-miR-87 | 21/21 | N/A | N/A | 60-80 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
50 | dpe-mir-87 | Drosophila persimilis | dpe-miR-87 | 21/21 | N/A | N/A | 60-80 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
51 | dps-mir-87 | Drosophila pseudoobscura | dps-miR-87 | 21/21 | chr4_group3 | + | 60-80 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
52 | dse-mir-87 | Drosophila sechellia | dse-miR-87 | 21/21 | N/A | N/A | 59-79 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
53 | dsi-mir-87 | Drosophila simulans | dsi-miR-87 | 21/21 | N/A | N/A | 59-79 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
54 | dvi-mir-87 | Drosophila virilis | dvi-miR-87 | 21/21 | N/A | N/A | 60-80 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
55 | dwi-mir-87-1 | Drosophila willistoni | dwi-miR-87 | 21/21 | N/A | N/A | 61-81 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
56 | dwi-mir-87-2 | Drosophila willistoni | dwi-miR-87 | 21/21 | N/A | N/A | 61-81 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
57 | dya-mir-87 | Drosophila yakuba | dya-miR-87 | 21/21 | N/A | N/A | 59-79 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
58 | lgi-mir-87 | Lottia gigantea | lgi-miR-87 | 22/22 | sca_160 | + | 61-82 | N/A | - | miRBase_13_0 | 21/27 | 1/39 |
59 | priPac1-27 | Pristionchus pacificus | cel-miR-87 | 22/22 | chrUn | - | 49-70 | 113454292-113454367 | 0.996931 | Ortholog | 21/27 | 1/39 |
60 | priPac1-27 | Pristionchus pacificus | sme-miR-87a | 18/20 | chrUn | - | 52-70 | 113454290-113454368 | 0.999548 | Ortholog | 21/27 | 1/39 |
61 | priPac1-27 | Pristionchus pacificus | bmo-miR-87 | 19/21 | chrUn | - | 49-68 | 113454292-113454367 | 0.999273 | Ortholog | 21/27 | 1/39 |
62 | priPac1-27 | Pristionchus pacificus | tca-miR-87 | 21/21 | chrUn | - | 50-70 | 113454290-113454368 | 0.998797 | Ortholog | 21/27 | 1/39 |
63 | sme-mir-87a | Schmidtea mediterranea | sme-miR-87a | 20/20 | Contig529.1 | - | 60-79 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
64 | sme-mir-87b | Schmidtea mediterranea | sme-miR-87b | 21/21 | Contig34678.2 | - | 70-90 | N/A | - | miRBase_13_0 | 21/27 | 2/39 |
65 | strPur2-115 | Strongylocentrotus purpuratus | dme-miR-87 | 19/21 | Scaffold86110 | + | 50-70 | 316311-316389 | 0.850825 | Ortholog | 21/27 | 2/39 |
66 | strPur2-92 | Strongylocentrotus purpuratus | tca-miR-87 | 19/21 | Scaffold74082 | + | 45-65 | 8806-8884 | 0.866115 | Ortholog | 21/27 | 2/39 |
67 | taeGut1-1 | Taeniopygia guttata | dme-miR-87 | 19/21 | chr1 | + | 20-39 | 4892545-4892611 | 0.883932 | Ortholog | 21/27 | 1/39 |
68 | tca-mir-87 | Tribolium castaneum | tca-miR-87 | 21/21 | CM000281.1 | + | 52-72 | N/A | - | miRBase_13_0 | 21/27 | 3/39 |
69 | triCas2-54 | Tribolium castaneum | cbr-miR-87 | 20/20 | ChLG6 | + | 51-70 | N/A | 0.999785 | Paralog | 21/27 | 3/39 |
70 | triCas2-54 | Tribolium castaneum | sme-miR-87a | 18/20 | ChLG6 | + | 52-70 | N/A | 0.999887 | Paralog | 21/27 | 3/39 |
71 | triCas2-54 | Tribolium castaneum | dme-miR-87 | 19/21 | ChLG6 | + | 52-71 | N/A | 0.999785 | Paralog | 21/27 | 3/39 |
72 | triCas2-54 | Tribolium castaneum | bmo-miR-87 | 20/21 | ChLG6 | + | 51-71 | N/A | 0.999844 | Paralog | 21/27 | 3/39 |
73 | triCas2-54 | Tribolium castaneum | tca-miR-87 | 21/21 | ChLG6 | + | 51-71 | N/A | 0.999584 | Paralog | 21/27 | 3/39 |
74 | triCas2-54 | Tribolium castaneum | aga-miR-87 | 19/21 | ChLG6 | + | 50-70 | N/A | 0.999584 | Paralog | 21/27 | 3/39 |
75 | triCas2-56 | Tribolium castaneum | cbr-miR-87 | 19/20 | ChLG6 | + | 52-71 | N/A | 0.998819 | Paralog | 21/27 | 3/39 |
76 | triCas2-56 | Tribolium castaneum | bmo-miR-87 | 19/21 | ChLG6 | + | 51-71 | N/A | 0.999451 | Paralog | 21/27 | 3/39 |
77 | triCas2-56 | Tribolium castaneum | aga-miR-87 | 20/21 | ChLG6 | + | 51-71 | N/A | 0.997943 | Paralog | 21/27 | 3/39 |
78 | triCas2-56 | Tribolium castaneum | tca-miR-87 | 20/21 | ChLG6 | + | 50-70 | N/A | 0.998136 | Paralog | 21/27 | 3/39 |
Total | 78 record(s). |