- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-873 | Bos taurus | bta-miR-873 | 21/21 | chr8 | + | 11-31 | N/A | - | miRBase_13_0 | 6/20 | 1/20 |
2 | calJac1-73 | Callithrix jacchus | oan-miR-873 | 21/21 | Contig1352 | - | 14-34 | 311726-311808 | 0.991661 | Ortholog | 6/20 | 1/20 |
3 | calJac1-73 | Callithrix jacchus | mmu-miR-873 | 21/21 | Contig1352 | - | 17-37 | 311724-311810 | 0.990993 | Ortholog | 6/20 | 1/20 |
4 | calJac1-73 | Callithrix jacchus | oan-miR-873* | 21/22 | Contig1352 | - | 49-70 | 311728-311806 | 0.964128 | Ortholog | 6/20 | 1/20 |
5 | canFam2-38 | Canis familiaris | mmu-miR-873 | 21/21 | chr11 | - | 17-37 | 49868634-49868720 | 0.990512 | Ortholog | 6/20 | 1/20 |
6 | canFam2-38 | Canis familiaris | oan-miR-873 | 21/21 | chr11 | - | 14-34 | 49868636-49868718 | 0.990993 | Ortholog | 6/20 | 1/20 |
7 | canFam2-38 | Canis familiaris | oan-miR-873* | 21/22 | chr11 | - | 49-70 | 49868638-49868716 | 0.964128 | Ortholog | 6/20 | 1/20 |
8 | cavPor3-330 | Cavia porcellus | mmu-miR-873 | 21/21 | scaffold_2 | - | 17-37 | 7394185-7394271 | 0.98753 | Ortholog | 6/20 | 1/20 |
9 | cavPor3-330 | Cavia porcellus | oan-miR-873 | 21/21 | scaffold_2 | - | 15-35 | 7394186-7394270 | 0.98912 | Ortholog | 6/20 | 1/20 |
10 | cavPor3-330 | Cavia porcellus | oan-miR-873* | 21/22 | scaffold_2 | - | 49-70 | 7394189-7394267 | 0.960831 | Ortholog | 6/20 | 1/20 |
11 | echTel1-356 | Echinops telfari | oan-miR-873 | 21/21 | scaffold_321257 | + | 14-34 | N/A | 0.819039 | Ortholog | 6/20 | 1/20 |
12 | echTel1-356 | Echinops telfari | mmu-miR-873 | 21/21 | scaffold_321257 | + | 15-35 | N/A | 0.819039 | Ortholog | 6/20 | 1/20 |
13 | equCab1-311 | Equus caballus | mmu-miR-873 | 21/21 | chr23 | - | 19-39 | 36812288-36812376 | 0.990512 | Ortholog | 6/20 | 1/20 |
14 | equCab1-311 | Equus caballus | oan-miR-873 | 21/21 | chr23 | - | 14-34 | 36812290-36812372 | 0.990993 | Ortholog | 6/20 | 1/20 |
15 | equCab1-311 | Equus caballus | oan-miR-873* | 21/22 | chr23 | - | 49-70 | 36812292-36812370 | 0.964128 | Ortholog | 6/20 | 1/20 |
16 | eriEur1-163 | Erinaceus europaeus | mmu-miR-873 | 21/21 | scaffold_347317 | - | 17-37 | N/A | 0.990512 | Ortholog | 6/20 | 1/20 |
17 | eriEur1-163 | Erinaceus europaeus | oan-miR-873* | 21/22 | scaffold_347317 | - | 49-70 | N/A | 0.964128 | Ortholog | 6/20 | 1/20 |
18 | eriEur1-163 | Erinaceus europaeus | oan-miR-873 | 21/21 | scaffold_347317 | - | 14-34 | N/A | 0.990993 | Ortholog | 6/20 | 1/20 |
19 | hsa-mir-873 | Homo sapiens | hsa-miR-873 | 21/21 | chr9 | - | 11-31 | 28878877-28878953 | - | miRBase_13_0 | 6/20 | 1/20 |
20 | loxAfr1-43 | Loxodonta africana | mmu-miR-873 | 21/21 | scaffold_133127 | + | 15-35 | N/A | 0.990993 | Ortholog | 6/20 | 1/20 |
21 | loxAfr1-43 | Loxodonta africana | oan-miR-873* | 21/22 | scaffold_133127 | + | 51-72 | N/A | 0.974186 | Ortholog | 6/20 | 1/20 |
22 | loxAfr1-43 | Loxodonta africana | oan-miR-873 | 21/21 | scaffold_133127 | + | 14-34 | N/A | 0.990993 | Ortholog | 6/20 | 1/20 |
23 | rheMac2-105 | Macaca mulatta | oan-miR-873* | 21/22 | chr15 | + | 51-72 | 48227763-48227845 | 0.974186 | Ortholog | 6/20 | 1/20 |
24 | rheMac2-105 | Macaca mulatta | oan-miR-873 | 21/21 | chr15 | + | 14-34 | 48227763-48227845 | 0.990993 | Ortholog | 6/20 | 1/20 |
25 | rheMac2-105 | Macaca mulatta | mmu-miR-873 | 21/21 | chr15 | + | 15-35 | 48227763-48227845 | 0.990993 | Ortholog | 6/20 | 1/20 |
26 | monDom4-382 | Monodelphis domestica | mmu-miR-873 | 21/21 | chr6 | - | 17-37 | 46253209-46253295 | 0.99245 | Ortholog | 6/20 | 1/20 |
27 | monDom4-382 | Monodelphis domestica | oan-miR-873 | 21/21 | chr6 | - | 15-35 | 46253210-46253294 | 0.992585 | Ortholog | 6/20 | 1/20 |
28 | monDom4-382 | Monodelphis domestica | oan-miR-873* | 22/22 | chr6 | - | 49-70 | 46253213-46253291 | 0.929891 | Ortholog | 6/20 | 1/20 |
29 | mmu-mir-873 | Mus musculus | mmu-miR-873 | 21/21 | chr4 | - | 11-31 | N/A | - | miRBase_13_0 | 6/20 | 1/20 |
30 | oan-mir-873 | Ornithorhynchus anatinus | oan-miR-873* | 22/22 | chrX5 | + | 53-74 | N/A | - | miRBase_13_0 | 6/20 | 1/20 |
31 | oan-mir-873 | Ornithorhynchus anatinus | oan-miR-873 | 21/21 | chrX5 | + | 16-36 | N/A | - | miRBase_13_0 | 6/20 | 1/20 |
32 | oryCun1-164 | Oryctolagus cuniculus | oan-miR-873* | 21/22 | scaffold_177354 | - | 49-70 | N/A | 0.964128 | Ortholog | 6/20 | 1/20 |
33 | oryCun1-164 | Oryctolagus cuniculus | oan-miR-873 | 21/21 | scaffold_177354 | - | 14-34 | N/A | 0.991661 | Ortholog | 6/20 | 1/20 |
34 | oryCun1-164 | Oryctolagus cuniculus | mmu-miR-873 | 21/21 | scaffold_177354 | - | 17-37 | N/A | 0.990993 | Ortholog | 6/20 | 1/20 |
35 | otoGar1-419 | Otolemur garnettii | mmu-miR-873 | 21/21 | scaffold_88153.1-321810 | - | 17-37 | N/A | 0.973988 | Ortholog | 6/20 | 1/20 |
36 | otoGar1-419 | Otolemur garnettii | oan-miR-873 | 21/21 | scaffold_88153.1-321810 | - | 14-34 | N/A | 0.975029 | Ortholog | 6/20 | 1/20 |
37 | ptr-mir-873 | Pan troglodytes | ptr-miR-873 | 21/21 | chr9 | - | 11-31 | N/A | - | miRBase_13_0 | 6/20 | 1/20 |
38 | ponAbe2-730 | Pongo abelii | mmu-miR-873 | 21/21 | chr9 | + | 15-35 | 32808483-32808565 | 0.990993 | Ortholog | 6/20 | 1/20 |
39 | ponAbe2-730 | Pongo abelii | oan-miR-873* | 21/22 | chr9 | + | 51-72 | 32808483-32808565 | 0.974186 | Ortholog | 6/20 | 1/20 |
40 | ponAbe2-730 | Pongo abelii | oan-miR-873 | 21/21 | chr9 | + | 14-34 | 32808483-32808565 | 0.990993 | Ortholog | 6/20 | 1/20 |
41 | rno-mir-873 | Rattus norvegicus | rno-miR-873 | 21/21 | chr5 | - | 11-31 | N/A | - | miRBase_13_0 | 6/20 | 1/20 |
42 | sorAra1-144 | Sorex araneus | mmu-miR-873 | 21/21 | scaffold_245447 | - | 17-37 | N/A | 0.995658 | Ortholog | 6/20 | 1/20 |
43 | sorAra1-144 | Sorex araneus | oan-miR-873 | 21/21 | scaffold_245447 | - | 14-34 | N/A | 0.995937 | Ortholog | 6/20 | 1/20 |
44 | tupBel1-84 | Tupaia belangeri | oan-miR-873 | 21/21 | scaffold_114024.1-460135 | - | 14-34 | N/A | 0.990993 | Ortholog | 6/20 | 1/20 |
45 | tupBel1-84 | Tupaia belangeri | oan-miR-873* | 21/22 | scaffold_114024.1-460135 | - | 49-70 | N/A | 0.964128 | Ortholog | 6/20 | 1/20 |
46 | tupBel1-84 | Tupaia belangeri | mmu-miR-873 | 21/21 | scaffold_114024.1-460135 | - | 17-37 | N/A | 0.990512 | Ortholog | 6/20 | 1/20 |
Total | 46 record(s). |