- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-876 | Bos taurus | bta-miR-876 | 22/22 | chr8 | + | 11-32 | N/A | - | miRBase_13_0 | 6/17 | 1/21 |
2 | calJac1-448 | Callithrix jacchus | hsa-miR-876-3p | 21/22 | Contig4012 | - | 49-70 | 25658-25736 | 0.999928 | Ortholog | 6/17 | 2/21 |
3 | calJac1-448 | Callithrix jacchus | hsa-miR-876-5p | 21/22 | Contig4012 | - | 12-33 | 25656-25738 | 0.999934 | Ortholog | 6/17 | 2/21 |
4 | calJac1-70 | Callithrix jacchus | mmu-miR-876-3p | 20/22 | Contig1352 | - | 50-69 | 285446-285522 | 0.999942 | Ortholog | 6/17 | 2/21 |
5 | calJac1-70 | Callithrix jacchus | hsa-miR-876-3p | 22/22 | Contig1352 | - | 49-70 | 285445-285523 | 0.999971 | Ortholog | 6/17 | 2/21 |
6 | calJac1-70 | Callithrix jacchus | hsa-miR-876-5p | 22/22 | Contig1352 | - | 12-33 | 285443-285525 | 0.999943 | Ortholog | 6/17 | 2/21 |
7 | canFam2-13 | Canis familiaris | cfa-miR-876 | 20/22 | chr1 | - | 45-65 | 96209185-96209260 | 0.868642 | Paralog | 6/17 | 2/21 |
8 | cfa-mir-876 | Canis familiaris | cfa-miR-876 | 22/22 | chr11 | - | 11-32 | N/A | - | miRBase_13_0 | 6/17 | 2/21 |
9 | cavPor3-327 | Cavia porcellus | hsa-miR-876-5p | 22/22 | scaffold_2 | - | 12-33 | 7371439-7371521 | 0.999943 | Ortholog | 6/17 | 1/21 |
10 | cavPor3-327 | Cavia porcellus | hsa-miR-876-3p | 22/22 | scaffold_2 | - | 49-70 | 7371441-7371519 | 0.999971 | Ortholog | 6/17 | 1/21 |
11 | cavPor3-327 | Cavia porcellus | mmu-miR-876-3p | 20/22 | scaffold_2 | - | 51-70 | 7371440-7371518 | 0.999974 | Ortholog | 6/17 | 1/21 |
12 | equCab1-308 | Equus caballus | hsa-miR-876-3p | 22/22 | chr23 | - | 49-70 | 36791881-36791959 | 0.999971 | Ortholog | 6/17 | 1/21 |
13 | equCab1-308 | Equus caballus | hsa-miR-876-5p | 22/22 | chr23 | - | 12-33 | 36791879-36791961 | 0.999943 | Ortholog | 6/17 | 1/21 |
14 | equCab1-308 | Equus caballus | mmu-miR-876-3p | 20/22 | chr23 | - | 50-69 | 36791882-36791958 | 0.999942 | Ortholog | 6/17 | 1/21 |
15 | eriEur1-121 | Erinaceus europaeus | mmu-miR-876-3p | 20/22 | scaffold_328733 | + | 53-72 | N/A | 0.999953 | Ortholog | 6/17 | 1/21 |
16 | eriEur1-121 | Erinaceus europaeus | hsa-miR-876-5p | 22/22 | scaffold_328733 | + | 10-31 | N/A | 0.999896 | Ortholog | 6/17 | 1/21 |
17 | eriEur1-121 | Erinaceus europaeus | hsa-miR-876-3p | 22/22 | scaffold_328733 | + | 51-72 | N/A | 0.999942 | Ortholog | 6/17 | 1/21 |
18 | felCat3-385 | Felis catus | hsa-miR-876-5p | 22/22 | scaffold_216907 | - | 12-33 | 183801-183883 | 0.999943 | Ortholog | 6/17 | 1/21 |
19 | felCat3-385 | Felis catus | hsa-miR-876-3p | 22/22 | scaffold_216907 | - | 49-70 | 183803-183881 | 0.999971 | Ortholog | 6/17 | 1/21 |
20 | felCat3-385 | Felis catus | mmu-miR-876-3p | 20/22 | scaffold_216907 | - | 50-69 | 183804-183880 | 0.999942 | Ortholog | 6/17 | 1/21 |
21 | hsa-mir-876 | Homo sapiens | hsa-miR-876-3p | 22/22 | chr9 | - | 50-71 | 28853624-28853704 | - | miRBase_13_0 | 6/17 | 1/21 |
22 | hsa-mir-876 | Homo sapiens | hsa-miR-876-5p | 22/22 | chr9 | - | 11-32 | 28853624-28853704 | - | miRBase_13_0 | 6/17 | 1/21 |
23 | loxAfr1-79 | Loxodonta africana | hsa-miR-876-5p | 22/22 | scaffold_167718 | + | 10-31 | N/A | 0.997305 | Ortholog | 6/17 | 1/21 |
24 | loxAfr1-79 | Loxodonta africana | hsa-miR-876-3p | 21/22 | scaffold_167718 | + | 51-72 | N/A | 0.997599 | Ortholog | 6/17 | 1/21 |
25 | mml-mir-876 | Macaca mulatta | mml-miR-876-3p | 22/22 | chr15 | + | 50-71 | N/A | - | miRBase_13_0 | 6/17 | 1/21 |
26 | mml-mir-876 | Macaca mulatta | mml-miR-876-5p | 22/22 | chr15 | + | 11-32 | N/A | - | miRBase_13_0 | 6/17 | 1/21 |
27 | mmu-mir-876 | Mus musculus | mmu-miR-876-3p | 22/22 | chr4 | - | 50-71 | N/A | - | miRBase_13_0 | 6/17 | 1/21 |
28 | mmu-mir-876 | Mus musculus | mmu-miR-876-5p | 22/22 | chr4 | - | 11-32 | N/A | - | miRBase_13_0 | 6/17 | 1/21 |
29 | oryCun1-118 | Oryctolagus cuniculus | mmu-miR-876-3p | 20/22 | scaffold_167658 | - | 50-69 | N/A | 0.999947 | Ortholog | 6/17 | 2/21 |
30 | oryCun1-118 | Oryctolagus cuniculus | hsa-miR-876-5p | 22/22 | scaffold_167658 | - | 12-33 | N/A | 0.999948 | Ortholog | 6/17 | 2/21 |
31 | oryCun1-118 | Oryctolagus cuniculus | hsa-miR-876-3p | 22/22 | scaffold_167658 | - | 49-70 | N/A | 0.999969 | Ortholog | 6/17 | 2/21 |
32 | oryCun1-97 | Oryctolagus cuniculus | mmu-miR-876-5p | 20/22 | scaffold_159246 | + | 51-71 | N/A | 0.914785 | Ortholog | 6/17 | 2/21 |
33 | otoGar1-416 | Otolemur garnettii | hsa-miR-876-3p | 22/22 | scaffold_88153.1-321810 | - | 49-70 | N/A | 0.999971 | Ortholog | 6/17 | 1/21 |
34 | otoGar1-416 | Otolemur garnettii | hsa-miR-876-5p | 22/22 | scaffold_88153.1-321810 | - | 12-33 | N/A | 0.999943 | Ortholog | 6/17 | 1/21 |
35 | otoGar1-416 | Otolemur garnettii | mmu-miR-876-3p | 20/22 | scaffold_88153.1-321810 | - | 50-69 | N/A | 0.999942 | Ortholog | 6/17 | 1/21 |
36 | ptr-mir-876 | Pan troglodytes | ptr-miR-876 | 22/22 | chr9 | - | 50-71 | N/A | - | miRBase_13_0 | 6/17 | 1/21 |
37 | ponAbe2-731 | Pongo abelii | mmu-miR-876-3p | 20/22 | chr9 | + | 52-71 | 32830710-32830790 | 0.999978 | Ortholog | 6/17 | 1/21 |
38 | ponAbe2-731 | Pongo abelii | hsa-miR-876-5p | 22/22 | chr9 | + | 10-31 | 32830711-32830789 | 0.999948 | Ortholog | 6/17 | 1/21 |
39 | ponAbe2-731 | Pongo abelii | hsa-miR-876-3p | 22/22 | chr9 | + | 51-72 | 32830709-32830791 | 0.99997 | Ortholog | 6/17 | 1/21 |
40 | rn4-258 | Rattus norvegicus | hsa-miR-876-3p | 21/22 | chr5 | - | 48-69 | 53434878-53434954 | 0.997776 | Ortholog | 6/17 | 2/21 |
41 | rn4-258 | Rattus norvegicus | mmu-miR-876-5p | 20/22 | chr5 | - | 13-32 | 53434876-53434958 | 0.995346 | Ortholog | 6/17 | 2/21 |
42 | rn4-258 | Rattus norvegicus | hsa-miR-876-5p | 21/22 | chr5 | - | 12-33 | 53434875-53434957 | 0.996328 | Ortholog | 6/17 | 2/21 |
43 | rn4-283 | Rattus norvegicus | mmu-miR-876-5p | 20/22 | chr6 | - | 20-41 | 8920569-8920656 | 0.997949 | Ortholog | 6/17 | 2/21 |
44 | tupBel1-81 | Tupaia belangeri | mmu-miR-876-3p | 20/22 | scaffold_114024.1-460135 | - | 50-69 | N/A | 0.999863 | Ortholog | 6/17 | 1/21 |
45 | tupBel1-81 | Tupaia belangeri | hsa-miR-876-3p | 22/22 | scaffold_114024.1-460135 | - | 49-70 | N/A | 0.999944 | Ortholog | 6/17 | 1/21 |
46 | tupBel1-81 | Tupaia belangeri | hsa-miR-876-5p | 22/22 | scaffold_114024.1-460135 | - | 10-31 | N/A | 0.999688 | Ortholog | 6/17 | 1/21 |
Total | 46 record(s). |