- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ci2-10 | Ciona intestinalis | mml-miR-942 | 19/21 | scaffold_593 | - | 42-62 | 34034-34112 | 0.940608 | Ortholog | 3/9 | 5/17 |
2 | ci2-16 | Ciona intestinalis | mml-miR-942 | 19/21 | scaffold_99 | - | 49-69 | 109785-109874 | 0.935965 | Ortholog | 3/9 | 5/17 |
3 | ci2-2 | Ciona intestinalis | mml-miR-942 | 19/21 | scaffold_201 | + | 51-71 | 91055-91156 | 0.918288 | Ortholog | 3/9 | 5/17 |
4 | ci2-6 | Ciona intestinalis | mml-miR-942 | 19/21 | scaffold_3767 | + | 51-71 | 3898-3996 | 0.853529 | Ortholog | 3/9 | 5/17 |
5 | ci2-8 | Ciona intestinalis | mml-miR-942 | 19/21 | scaffold_429 | - | 49-69 | 24705-24797 | 0.960604 | Ortholog | 3/9 | 5/17 |
6 | droEre2-69 | Drosophila erecta | mml-miR-942 | 19/21 | scaffold_4820 | + | 27-47 | 7261498-7261592 | 0.943196 | Ortholog | 3/9 | 1/17 |
7 | droSec1-128 | Drosophila sechellia | mml-miR-942 | 19/21 | super_6 | - | 23-42 | 1991373-1991465 | 0.98888 | Ortholog | 3/9 | 1/17 |
8 | droSim1-94 | Drosophila simulans | mml-miR-942 | 19/21 | chr3R | - | 23-42 | 1916992-1917084 | 0.98888 | Ortholog | 3/9 | 1/17 |
9 | droYak2-117 | Drosophila yakuba | mml-miR-942 | 19/21 | chr3R | + | 51-71 | 25706798-25706892 | 0.982921 | Ortholog | 3/9 | 2/17 |
10 | droYak2-130 | Drosophila yakuba | mml-miR-942 | 19/21 | chr3R | - | 23-42 | 17833715-17833807 | 0.978756 | Ortholog | 3/9 | 2/17 |
11 | hg18-11 | Homo sapiens | mml-miR-942 | 20/21 | chr1 | - | 12-32 | 117438789-117438870 | 0.999088 | Paralog | 3/9 | 2/17 |
12 | hsa-mir-942 | Homo sapiens | hsa-miR-942 | 22/22 | chr1 | + | 13-34 | 117438788-117438873 | - | miRBase_13_0 | 3/9 | 2/17 |
13 | mml-mir-942 | Macaca mulatta | mml-miR-942 | 21/21 | chr1 | + | 14-34 | N/A | - | miRBase_13_0 | 3/9 | 1/17 |
14 | panTro2-6 | Pan troglodytes | mml-miR-942 | 20/21 | chr1 | + | 11-31 | 120494529-120494608 | 0.999461 | Paralog | 3/9 | 2/17 |
15 | ptr-mir-942 | Pan troglodytes | ptr-miR-942 | 22/22 | chr1 | - | 13-34 | N/A | - | miRBase_13_0 | 3/9 | 2/17 |
16 | ponAbe2-30 | Pongo abelii | mml-miR-942 | 20/21 | chr1 | + | 11-31 | 111057261-111057340 | 0.998964 | Ortholog | 3/9 | 2/17 |
17 | ponAbe2-54 | Pongo abelii | mml-miR-942 | 19/21 | chr1 | - | 11-29 | 111057260-111057339 | 0.999585 | Ortholog | 3/9 | 2/17 |
Total | 17 record(s). |