- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-96 | Bos taurus | bta-miR-96 | 23/23 | chr4 | - | 24-46 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
2 | bfl-mir-96 | Branchiostoma floridae | bfl-miR-96 | 23/23 | Bf_V2_186 | + | 21-43 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
3 | calJac1-209 | Callithrix jacchus | hsa-miR-96 | 23/23 | Contig1906 | + | 12-34 | 280575-280656 | 0.999916 | Ortholog | 22/32 | 1/38 |
4 | calJac1-209 | Callithrix jacchus | oan-miR-96* | 21/22 | Contig1906 | + | 51-72 | 280576-280655 | 0.999654 | Ortholog | 22/32 | 1/38 |
5 | calJac1-209 | Callithrix jacchus | mml-miR-96 | 22/22 | Contig1906 | + | 11-32 | 280576-280655 | 0.999845 | Ortholog | 22/32 | 1/38 |
6 | cfa-mir-96 | Canis familiaris | cfa-miR-96 | 23/23 | chr14 | + | 14-36 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
7 | cap-mir-96 | Capitella sp. | cap-miR-96 | 22/22 | scaffold_181 | + | 15-36 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
8 | cavPor3-72 | Cavia porcellus | mml-miR-96 | 22/22 | scaffold_11 | - | 11-32 | 50142175-50142256 | 0.999566 | Ortholog | 22/32 | 1/38 |
9 | cavPor3-72 | Cavia porcellus | hsa-miR-96 | 23/23 | scaffold_11 | - | 11-33 | 50142175-50142256 | 0.999658 | Ortholog | 22/32 | 1/38 |
10 | dre-mir-96 | Danio rerio | dre-miR-96 | 23/23 | chr4 | + | 24-46 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
11 | dasNov1-220 | Dasypus novemcinctus | hsa-miR-96 | 23/23 | scaffold_36676 | - | 11-33 | N/A | 0.999397 | Ortholog | 22/32 | 1/38 |
12 | dasNov1-220 | Dasypus novemcinctus | mml-miR-96 | 22/22 | scaffold_36676 | - | 11-32 | N/A | 0.999232 | Ortholog | 22/32 | 1/38 |
13 | dasNov1-220 | Dasypus novemcinctus | sko-miR-96 | 19/21 | scaffold_36676 | - | 13-31 | N/A | 0.999645 | Ortholog | 22/32 | 1/38 |
14 | echTel1-132 | Echinops telfari | sko-miR-96 | 19/21 | scaffold_269121 | - | 39-57 | N/A | 0.92269 | Ortholog | 22/32 | 2/38 |
15 | echTel1-132 | Echinops telfari | hsa-miR-96 | 23/23 | scaffold_269121 | - | 11-33 | N/A | 0.999701 | Ortholog | 22/32 | 2/38 |
16 | echTel1-132 | Echinops telfari | mml-miR-96 | 22/22 | scaffold_269121 | - | 11-32 | N/A | 0.999622 | Ortholog | 22/32 | 2/38 |
17 | echTel1-178 | Echinops telfari | hsa-miR-96 | 23/23 | scaffold_285791 | - | 11-33 | N/A | 0.999701 | Ortholog | 22/32 | 2/38 |
18 | echTel1-178 | Echinops telfari | mml-miR-96 | 22/22 | scaffold_285791 | - | 11-32 | N/A | 0.999622 | Ortholog | 22/32 | 2/38 |
19 | echTel1-178 | Echinops telfari | sko-miR-96 | 19/21 | scaffold_285791 | - | 39-57 | N/A | 0.92269 | Ortholog | 22/32 | 2/38 |
20 | equCab1-476 | Equus caballus | mml-miR-96 | 22/22 | chr4 | - | 11-32 | 83807996-83808077 | 0.999672 | Ortholog | 22/32 | 1/38 |
21 | equCab1-476 | Equus caballus | hsa-miR-96 | 23/23 | chr4 | - | 11-33 | 83807996-83808077 | 0.99974 | Ortholog | 22/32 | 1/38 |
22 | felCat3-258 | Felis catus | hsa-miR-96 | 23/23 | scaffold_194106 | - | 11-33 | 196023-196104 | 0.99974 | Ortholog | 22/32 | 1/38 |
23 | felCat3-258 | Felis catus | mml-miR-96 | 22/22 | scaffold_194106 | - | 11-32 | 196023-196104 | 0.999672 | Ortholog | 22/32 | 1/38 |
24 | fr2-185 | Fugu rubripes | oan-miR-96* | 21/22 | chrUn | - | 48-69 | 31436730-31436801 | 0.998711 | Paralog | 22/32 | 2/38 |
25 | fr2-185 | Fugu rubripes | sko-miR-96 | 19/21 | chrUn | - | 9-27 | 31436727-31436804 | 0.999531 | Paralog | 22/32 | 2/38 |
26 | fr2-185 | Fugu rubripes | mml-miR-96 | 22/22 | chrUn | - | 14-35 | 31436725-31436809 | 0.999316 | Paralog | 22/32 | 2/38 |
27 | fr2-185 | Fugu rubripes | fru-miR-96 | 23/23 | chrUn | - | 14-36 | 31436725-31436809 | 0.999397 | Paralog | 22/32 | 2/38 |
28 | fru-mir-96 | Fugu rubripes | fru-miR-96 | 23/23 | scaffold_8 | - | 16-38 | N/A | - | miRBase_13_0 | 22/32 | 2/38 |
29 | gasAcu1-127 | Gasterosteus aculeatus | mml-miR-96 | 22/22 | chrIV | + | 8-29 | 29062306-29062382 | 0.999685 | Ortholog | 22/32 | 2/38 |
30 | gasAcu1-127 | Gasterosteus aculeatus | hsa-miR-96 | 23/23 | chrIV | + | 9-31 | 29062305-29062383 | 0.999626 | Ortholog | 22/32 | 2/38 |
31 | gasAcu1-127 | Gasterosteus aculeatus | sko-miR-96 | 19/21 | chrIV | + | 12-30 | 29062302-29062380 | 0.999542 | Ortholog | 22/32 | 2/38 |
32 | gasAcu1-555 | Gasterosteus aculeatus | mml-miR-96 | 22/22 | chrXIX | + | 8-29 | 15173689-15173765 | 0.999271 | Ortholog | 22/32 | 2/38 |
33 | gasAcu1-555 | Gasterosteus aculeatus | sko-miR-96 | 19/21 | chrXIX | + | 6-24 | 15173691-15173763 | 0.999213 | Ortholog | 22/32 | 2/38 |
34 | gasAcu1-555 | Gasterosteus aculeatus | hsa-miR-96 | 23/23 | chrXIX | + | 9-31 | 15173688-15173766 | 0.998816 | Ortholog | 22/32 | 2/38 |
35 | ggo-mir-96 | Gorilla gorilla | ggo-miR-96 | 22/22 | N/A | N/A | 9-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
36 | hsa-mir-96 | Homo sapiens | hsa-miR-96* | 22/22 | chr7 | - | 52-73 | 129201768-129201845 | - | miRBase_13_0 | 22/32 | 1/38 |
37 | hsa-mir-96 | Homo sapiens | hsa-miR-96 | 23/23 | chr7 | - | 9-31 | 129201768-129201845 | - | miRBase_13_0 | 22/32 | 1/38 |
38 | lgi-mir-96a | Lottia gigantea | lgi-miR-96a | 22/22 | sca_31 | + | 9-30 | N/A | - | miRBase_13_0 | 22/32 | 2/38 |
39 | lgi-mir-96b | Lottia gigantea | lgi-miR-96b | 23/23 | sca_112 | + | 6-28 | N/A | - | miRBase_13_0 | 22/32 | 2/38 |
40 | mml-mir-96 | Macaca mulatta | mml-miR-96 | 22/22 | chr3 | - | 9-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
41 | mne-mir-96 | Macaca nemestrina | mne-miR-96 | 22/22 | N/A | N/A | 9-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
42 | mdo-mir-96 | Monodelphis domestica | mdo-miR-96 | 23/23 | chr8 | - | 19-41 | N/A | - | miRBase_13_0 | 22/32 | 2/38 |
43 | monDom4-447 | Monodelphis domestica | mml-miR-96 | 22/22 | chr8 | - | 11-32 | 185592663-185592744 | 0.999328 | Paralog | 22/32 | 2/38 |
44 | monDom4-447 | Monodelphis domestica | mdo-miR-96 | 23/23 | chr8 | - | 11-33 | 185592663-185592744 | 0.999414 | Paralog | 22/32 | 2/38 |
45 | mmu-mir-96 | Mus musculus | mmu-miR-96 | 23/23 | chr6 | - | 24-46 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
46 | oan-mir-96 | Ornithorhynchus anatinus | oan-miR-96* | 22/22 | chr10 | - | 66-87 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
47 | oan-mir-96 | Ornithorhynchus anatinus | oan-miR-96 | 23/23 | chr10 | - | 24-46 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
48 | oryCun1-82 | Oryctolagus cuniculus | hsa-miR-96 | 23/23 | scaffold_146460 | + | 49-71 | N/A | 0.939634 | Ortholog | 22/32 | 1/38 |
49 | oryCun1-82 | Oryctolagus cuniculus | mml-miR-96 | 22/22 | scaffold_146460 | + | 51-72 | N/A | 0.896225 | Ortholog | 22/32 | 1/38 |
50 | oryCun1-82 | Oryctolagus cuniculus | sko-miR-96 | 19/21 | scaffold_146460 | + | 52-70 | N/A | 0.866683 | Ortholog | 22/32 | 1/38 |
51 | ppa-mir-96 | Pan paniscus | ppa-miR-96 | 22/22 | N/A | N/A | 9-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
52 | ptr-mir-96 | Pan troglodytes | ptr-miR-96 | 22/22 | chr7 | - | 9-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
53 | ponAbe2-693 | Pongo abelii | sko-miR-96 | 19/21 | chr7 | - | 41-59 | 126690695-126690803 | 0.98679 | Ortholog | 22/32 | 1/38 |
54 | ponAbe2-693 | Pongo abelii | mml-miR-96 | 22/22 | chr7 | - | 11-32 | 126690692-126690773 | 0.999672 | Ortholog | 22/32 | 1/38 |
55 | ponAbe2-693 | Pongo abelii | hsa-miR-96 | 23/23 | chr7 | - | 11-33 | 126690692-126690773 | 0.99974 | Ortholog | 22/32 | 1/38 |
56 | rno-mir-96 | Rattus norvegicus | rno-miR-96 | 23/23 | chr4 | - | 24-46 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
57 | sko-mir-96 | Saccoglossus kowalevskii | sko-miR-96 | 21/21 | N/A | N/A | 5-25 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
58 | sla-mir-96 | Saguinus labiatus | sla-miR-96 | 22/22 | N/A | N/A | 9-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
59 | sorAra1-259 | Sorex araneus | sko-miR-96 | 19/21 | scaffold_85843 | + | 10-28 | N/A | 0.999902 | Ortholog | 22/32 | 1/38 |
60 | sorAra1-259 | Sorex araneus | mml-miR-96 | 22/22 | scaffold_85843 | + | 10-31 | N/A | 0.999904 | Ortholog | 22/32 | 1/38 |
61 | sorAra1-259 | Sorex araneus | hsa-miR-96 | 23/23 | scaffold_85843 | + | 10-32 | N/A | 0.999895 | Ortholog | 22/32 | 1/38 |
62 | spu-mir-96 | Strongylocentrotus purpuratus | spu-miR-96 | 21/21 | N/A | N/A | 10-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
63 | tetNig1-48 | Tetraodon nigroviridis | mml-miR-96 | 21/22 | chr13 | - | 13-33 | 4585020-4585102 | 0.998655 | Paralog | 22/32 | 2/38 |
64 | tetNig1-48 | Tetraodon nigroviridis | sko-miR-96 | 19/21 | chr13 | - | 11-29 | 4585021-4585100 | 0.997615 | Paralog | 22/32 | 2/38 |
65 | tni-mir-96 | Tetraodon nigroviridis | tni-miR-96 | 23/23 | chr19 | - | 9-31 | N/A | - | miRBase_13_0 | 22/32 | 2/38 |
66 | xtr-mir-96 | Xenopus tropicalis | xtr-miR-96 | 23/23 | scaffold_11 | - | 8-30 | N/A | - | miRBase_13_0 | 22/32 | 1/38 |
Total | 66 record(s). |