- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | bta-mir-99a | Bos taurus | bta-miR-99a | 21/21 | chr1 | - | 13-33 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
2 | bta-mir-99b | Bos taurus | bta-miR-99b | 22/22 | chr18 | + | 7-28 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
3 | cfa-mir-99a-1 | Canis familiaris | cfa-miR-99a | 21/21 | chr31 | + | 1-21 | N/A | - | miRBase_13_0 | 17/32 | 3/46 |
4 | cfa-mir-99a-2 | Canis familiaris | cfa-miR-99a | 21/21 | chr5 | + | 1-21 | N/A | - | miRBase_13_0 | 17/32 | 3/46 |
5 | cfa-mir-99b | Canis familiaris | cfa-miR-99b | 22/22 | chr1 | - | 1-22 | N/A | - | miRBase_13_0 | 17/32 | 3/46 |
6 | dre-mir-99-1 | Danio rerio | dre-miR-99 | 22/22 | chr15 | - | 14-35 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
7 | dre-mir-99-2 | Danio rerio | dre-miR-99 | 22/22 | chr10 | - | 12-33 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
8 | gga-mir-99a | Gallus gallus | gga-miR-99a | 22/22 | chr1 | + | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
9 | gga-mir-99a | Gallus gallus | gga-miR-99a* | 21/21 | chr1 | + | 50-70 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
10 | ggo-mir-99a | Gorilla gorilla | ggo-miR-99a | 22/22 | N/A | N/A | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
11 | hsa-mir-99a | Homo sapiens | hsa-miR-99a | 22/22 | chr21 | + | 13-34 | 16833280-16833360 | - | miRBase_13_0 | 17/32 | 2/46 |
12 | hsa-mir-99a | Homo sapiens | hsa-miR-99a* | 22/22 | chr21 | + | 50-71 | 16833280-16833360 | - | miRBase_13_0 | 17/32 | 2/46 |
13 | hsa-mir-99b | Homo sapiens | hsa-miR-99b | 22/22 | chr19 | + | 7-28 | 56887677-56887746 | - | miRBase_13_0 | 17/32 | 2/46 |
14 | hsa-mir-99b | Homo sapiens | hsa-miR-99b* | 22/22 | chr19 | + | 45-66 | 56887677-56887746 | - | miRBase_13_0 | 17/32 | 2/46 |
15 | lla-mir-99a | Lagothrix lagotricha | lla-miR-99a | 22/22 | N/A | N/A | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
16 | mml-mir-99a | Macaca mulatta | mml-miR-99a | 22/22 | chr3 | - | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
17 | mml-mir-99b | Macaca mulatta | mml-miR-99b | 22/22 | chr19 | + | 7-28 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
18 | mne-mir-99a | Macaca nemestrina | mne-miR-99a | 22/22 | N/A | N/A | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
19 | mmu-mir-99a | Mus musculus | mmu-miR-99a | 22/22 | chr16 | + | 5-26 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
20 | mmu-mir-99b | Mus musculus | mmu-miR-99b | 22/22 | chr17 | + | 7-28 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
21 | mmu-mir-99b | Mus musculus | mmu-miR-99b* | 22/22 | chr17 | + | 45-66 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
22 | oan-mir-99 | Ornithorhynchus anatinus | oan-miR-99 | 21/21 | Ultra41 | + | 24-44 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
23 | oan-mir-99 | Ornithorhynchus anatinus | oan-miR-99* | 22/22 | Ultra41 | + | 61-82 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
24 | ppa-mir-99a | Pan paniscus | ppa-miR-99a | 22/22 | N/A | N/A | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
25 | ptr-mir-99a | Pan troglodytes | ptr-miR-99a | 22/22 | chr21 | + | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
26 | ptr-mir-99b | Pan troglodytes | ptr-miR-99b | 22/22 | chr19 | + | 6-27 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
27 | ppy-mir-99a | Pongo pygmaeus | ppy-miR-99a | 22/22 | N/A | N/A | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
28 | rno-mir-99a | Rattus norvegicus | rno-miR-99a | 22/22 | chr11 | + | 13-34 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
29 | rno-mir-99a | Rattus norvegicus | rno-miR-99a* | 22/22 | chr11 | + | 50-71 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
30 | rno-mir-99b | Rattus norvegicus | rno-miR-99b | 22/22 | chr1 | + | 7-28 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
31 | rno-mir-99b | Rattus norvegicus | rno-miR-99b* | 22/22 | chr1 | + | 45-66 | N/A | - | miRBase_13_0 | 17/32 | 2/46 |
32 | ssc-mir-99b | Sus scrofa | ssc-miR-99b | 22/22 | chr6 | + | 7-28 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
33 | xtr-mir-99 | Xenopus tropicalis | xtr-miR-99 | 22/22 | scaffold_475 | + | 8-29 | N/A | - | miRBase_13_0 | 17/32 | 1/46 |
Total | 33 record(s). |