- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | anoCar1-258 | Anolis carolinensis | gga-miR-99a* | 21/21 | scaffold_477 | - | 50-70 | 351977-352058 | 0.992154 | Ortholog | 17/32 | 1/46 |
2 | braFlo1-38 | Branchiostoma floridae | gga-miR-99a* | 19/21 | chrUn | + | 49-69 | 544468867-544468948 | 0.997218 | Ortholog | 17/32 | 2/46 |
3 | braFlo1-57 | Branchiostoma floridae | gga-miR-99a* | 19/21 | chrUn | + | 49-69 | 670131049-670131130 | 0.997218 | Ortholog | 17/32 | 2/46 |
4 | calJac1-111 | Callithrix jacchus | mmu-miR-99b* | 22/22 | Contig15220 | - | 49-70 | 18581-18658 | 0.974847 | Ortholog | 17/32 | 2/46 |
5 | calJac1-111 | Callithrix jacchus | mmu-miR-99b | 22/22 | Contig15220 | - | 14-35 | 18577-18661 | 0.89066 | Ortholog | 17/32 | 2/46 |
6 | calJac1-493 | Callithrix jacchus | gga-miR-99a* | 21/21 | Contig483 | - | 50-70 | 271360-271441 | 0.999033 | Ortholog | 17/32 | 2/46 |
7 | calJac1-493 | Callithrix jacchus | rno-miR-99a* | 21/22 | Contig483 | - | 49-70 | 271361-271440 | 0.998423 | Ortholog | 17/32 | 2/46 |
8 | cavPor3-489 | Cavia porcellus | oan-miR-99* | 20/22 | scaffold_34 | - | 49-70 | 6525099-6525178 | 0.994642 | Ortholog | 17/32 | 2/46 |
9 | cavPor3-489 | Cavia porcellus | gga-miR-99a* | 21/21 | scaffold_34 | - | 50-70 | 6525098-6525179 | 0.996766 | Ortholog | 17/32 | 2/46 |
10 | cavPor3-707 | Cavia porcellus | mmu-miR-99b* | 22/22 | scaffold_70 | - | 49-70 | 6340359-6340436 | 0.980429 | Ortholog | 17/32 | 2/46 |
11 | cavPor3-707 | Cavia porcellus | mmu-miR-99b | 22/22 | scaffold_70 | - | 14-35 | 6340355-6340439 | 0.908757 | Ortholog | 17/32 | 2/46 |
12 | dasNov1-335 | Dasypus novemcinctus | rno-miR-99a* | 21/22 | scaffold_676 | - | 49-70 | N/A | 0.998348 | Ortholog | 17/32 | 1/46 |
13 | dasNov1-335 | Dasypus novemcinctus | gga-miR-99a* | 21/21 | scaffold_676 | - | 50-70 | N/A | 0.998989 | Ortholog | 17/32 | 1/46 |
14 | equCab1-399 | Equus caballus | gga-miR-99a* | 21/21 | chr26 | - | 50-70 | 26376786-26376867 | 0.998694 | Ortholog | 17/32 | 2/46 |
15 | equCab1-399 | Equus caballus | oan-miR-99* | 20/22 | chr26 | - | 49-70 | 26376787-26376866 | 0.997609 | Ortholog | 17/32 | 2/46 |
16 | equCab1-721 | Equus caballus | mmu-miR-99b | 22/22 | chrUn | - | 13-34 | 212695082-212695165 | 0.881961 | Ortholog | 17/32 | 2/46 |
17 | equCab1-721 | Equus caballus | mmu-miR-99b* | 22/22 | chrUn | - | 49-70 | 212695084-212695163 | 0.988969 | Ortholog | 17/32 | 2/46 |
18 | eriEur1-141 | Erinaceus europaeus | rno-miR-99a* | 21/22 | scaffold_341065 | - | 49-70 | N/A | 0.999165 | Ortholog | 17/32 | 1/46 |
19 | eriEur1-141 | Erinaceus europaeus | gga-miR-99a* | 21/21 | scaffold_341065 | - | 50-70 | N/A | 0.999474 | Ortholog | 17/32 | 1/46 |
20 | loxAfr1-349 | Loxodonta africana | rno-miR-99a* | 21/22 | scaffold_6710 | - | 49-70 | N/A | 0.998423 | Ortholog | 17/32 | 1/46 |
21 | loxAfr1-349 | Loxodonta africana | gga-miR-99a* | 21/21 | scaffold_6710 | - | 50-70 | N/A | 0.999033 | Ortholog | 17/32 | 1/46 |
22 | oryCun1-328 | Oryctolagus cuniculus | rno-miR-99a* | 21/22 | scaffold_203217 | + | 51-72 | N/A | 0.998341 | Ortholog | 17/32 | 1/46 |
23 | oryCun1-328 | Oryctolagus cuniculus | gga-miR-99a* | 21/21 | scaffold_203217 | + | 51-71 | N/A | 0.999071 | Ortholog | 17/32 | 1/46 |
24 | otoGar1-37 | Otolemur garnettii | gga-miR-99a* | 21/21 | scaffold_106237.1-630428 | + | 51-71 | N/A | 0.999071 | Ortholog | 17/32 | 1/46 |
25 | otoGar1-37 | Otolemur garnettii | rno-miR-99a* | 21/22 | scaffold_106237.1-630428 | + | 51-72 | N/A | 0.998341 | Ortholog | 17/32 | 1/46 |
26 | petMar1-50 | Petromyzon marinus | rno-miR-99a* | 20/22 | Contig21170 | + | 51-72 | 9604-9690 | 0.97425 | Ortholog | 17/32 | 1/46 |
27 | ponAbe2-506 | Pongo abelii | gga-miR-99a* | 21/21 | chr21 | + | 51-71 | 16252605-16252688 | 0.998637 | Ortholog | 17/32 | 1/46 |
28 | ponAbe2-506 | Pongo abelii | rno-miR-99a* | 21/22 | chr21 | + | 51-72 | 16252605-16252688 | 0.997561 | Ortholog | 17/32 | 1/46 |
29 | sorAra1-155 | Sorex araneus | rno-miR-99a* | 21/22 | scaffold_247634 | - | 49-70 | N/A | 0.997362 | Ortholog | 17/32 | 1/46 |
30 | sorAra1-155 | Sorex araneus | gga-miR-99a* | 21/21 | scaffold_247634 | - | 50-70 | N/A | 0.99841 | Ortholog | 17/32 | 1/46 |
31 | taeGut1-10 | Taeniopygia guttata | oan-miR-99* | 20/22 | chr1 | + | 51-72 | 109661964-109662047 | 0.996852 | Ortholog | 17/32 | 2/46 |
32 | taeGut1-10 | Taeniopygia guttata | gga-miR-99a* | 21/21 | chr1 | + | 51-71 | 109661964-109662047 | 0.998316 | Ortholog | 17/32 | 2/46 |
33 | taeGut1-339 | Taeniopygia guttata | gga-miR-99a* | 21/21 | chrUn | + | 51-71 | 52861466-52861549 | 0.998316 | Ortholog | 17/32 | 2/46 |
34 | taeGut1-339 | Taeniopygia guttata | oan-miR-99* | 20/22 | chrUn | + | 51-72 | 52861466-52861549 | 0.996852 | Ortholog | 17/32 | 2/46 |
35 | tupBel1-24 | Tupaia belangeri | rno-miR-99a* | 21/22 | scaffold_10796.1-87972 | + | 51-72 | N/A | 0.993268 | Ortholog | 17/32 | 1/46 |
36 | tupBel1-24 | Tupaia belangeri | gga-miR-99a* | 21/21 | scaffold_10796.1-87972 | + | 51-71 | N/A | 0.996393 | Ortholog | 17/32 | 1/46 |
Total | 36 record(s). |