- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | monDom4-392 | Monodelphis domestica | mdo-let-7a | 20/22 | chr6 | - | 27-47 | 209100119-209100212 | 0.966636 | Paralog | 44/65 | 17/337 |
2 | monDom4-361 | Monodelphis domestica | mdo-let-7b | 22/22 | chr5 | - | 47-68 | 305570973-305571058 | 0.996889 | Paralog | 44/65 | 17/337 |
3 | monDom4-392 | Monodelphis domestica | hsa-let-7d | 22/22 | chr6 | - | 26-47 | 209100119-209100212 | 0.95719 | Paralog | 44/65 | 17/337 |
4 | monDom4-479 | Monodelphis domestica | mdo-let-7f | 22/22 | chrUn | - | 4-25 | 94508579-94508653 | 0.997478 | Paralog | 44/65 | 17/337 |
5 | monDom4-377 | Monodelphis domestica | mmu-let-7g | 22/22 | chr6 | + | 25-46 | 229715146-229715239 | 0.967677 | Paralog | 44/65 | 17/337 |
6 | monDom4-426 | Monodelphis domestica | mmu-let-7i | 22/22 | chr8 | + | 27-48 | 18176935-18177021 | 0.991398 | Paralog | 44/65 | 17/337 |
7 | monDom4-479 | Monodelphis domestica | dme-let-7 | 20/21 | chrUn | - | 3-23 | 94508580-94508652 | 0.990363 | Paralog | 44/65 | 17/337 |
8 | monDom4-426 | Monodelphis domestica | mdo-let-7i | 21/21 | chr8 | + | 27-47 | 18176935-18177021 | 0.990709 | Paralog | 44/65 | 17/337 |
9 | monDom4-377 | Monodelphis domestica | mdo-let-7g | 21/21 | chr6 | + | 25-45 | 229715146-229715239 | 0.957136 | Paralog | 44/65 | 17/337 |
10 | monDom4-295 | Monodelphis domestica | aga-let-7 | 20/21 | chr4 | + | 6-26 | 226185492-226185566 | 0.993676 | Paralog | 44/65 | 17/337 |
11 | monDom4-393 | Monodelphis domestica | aga-let-7 | 20/21 | chr6 | - | 2-22 | 209105674-209105745 | 0.989021 | Paralog | 44/65 | 17/337 |
12 | monDom4-426 | Monodelphis domestica | ssc-let-7i | 19/19 | chr8 | + | 27-45 | 18176935-18177021 | 0.992406 | Paralog | 44/65 | 17/337 |
13 | monDom4-392 | Monodelphis domestica | mdo-let-7d | 21/21 | chr6 | - | 26-46 | 209100119-209100212 | 0.940961 | Paralog | 44/65 | 17/337 |
14 | monDom4-362 | Monodelphis domestica | spu-let-7 | 21/22 | chr5 | - | 49-70 | 305572458-305572551 | 0.829939 | Paralog | 44/65 | 17/337 |
15 | monDom4-295 | Monodelphis domestica | spu-let-7 | 21/22 | chr4 | + | 6-27 | 226185492-226185566 | 0.995863 | Paralog | 44/65 | 17/337 |
16 | monDom4-393 | Monodelphis domestica | spu-let-7 | 21/22 | chr6 | - | 3-24 | 209105673-209105746 | 0.989633 | Paralog | 44/65 | 17/337 |
17 | monDom4-295 | Monodelphis domestica | hsa-let-7a-2* | 22/22 | chr4 | + | 51-72 | 226185492-226185566 | 0.811794 | Paralog | 44/65 | 17/337 |
18 | mdo-let-7d | Monodelphis domestica | mdo-let-7d | 21/21 | chr6 | - | 16-36 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
19 | mdo-let-7f-1 | Monodelphis domestica | mdo-let-7f | 22/22 | chr6 | - | 7-28 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
20 | mdo-let-7a-1 | Monodelphis domestica | mdo-let-7a | 22/22 | chr6 | - | 15-36 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
21 | mdo-let-7b | Monodelphis domestica | mdo-let-7b | 22/22 | chr8 | - | 8-29 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
22 | mdo-let-7a-3 | Monodelphis domestica | mdo-let-7a | 22/22 | chr8 | - | 5-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
23 | mdo-let-7f-2 | Monodelphis domestica | mdo-let-7f | 22/22 | chrUn | - | 5-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
24 | mdo-let-7i | Monodelphis domestica | mdo-let-7i | 21/21 | chr8 | + | 6-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
25 | mdo-let-7g | Monodelphis domestica | mdo-let-7g | 21/21 | chr6 | + | 5-25 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
26 | mdo-let-7a-2 | Monodelphis domestica | mdo-let-7a | 22/22 | chr4 | + | 5-26 | N/A | - | miRBase_13_0 | 44/65 | 17/337 |
Total | 26 record(s). |