- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | calJac1-59 | Callithrix jacchus | mmu-miR-1187 | 22/23 | Contig12898 | - | 9-30 | 882-945 | 0.99959 | Ortholog | 1/43 | 40/1248 |
2 | calJac1-537 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig5291 | - | 17-37 | 112977-113062 | 0.896185 | Ortholog | 1/43 | 40/1248 |
3 | calJac1-147 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig1650 | + | 51-71 | 401477-401576 | 0.946905 | Ortholog | 1/43 | 40/1248 |
4 | calJac1-113 | Callithrix jacchus | mmu-miR-1187 | 22/23 | Contig1539 | + | 5-27 | 56358-56424 | 0.997845 | Ortholog | 1/43 | 40/1248 |
5 | calJac1-644 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig8032 | - | 47-67 | 11209-11298 | 0.999645 | Ortholog | 1/43 | 40/1248 |
6 | calJac1-25 | Callithrix jacchus | mmu-miR-1187 | 22/23 | Contig1064 | + | 24-46 | 304413-304500 | 0.910657 | Ortholog | 1/43 | 40/1248 |
7 | calJac1-94 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig14659 | + | 50-70 | 2803-2901 | 0.858491 | Ortholog | 1/43 | 40/1248 |
8 | calJac1-512 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig5058 | - | 31-51 | 76210-76308 | 0.805616 | Ortholog | 1/43 | 40/1248 |
9 | calJac1-310 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig245 | - | 2-22 | 193968-194039 | 0.844182 | Ortholog | 1/43 | 40/1248 |
10 | calJac1-224 | Callithrix jacchus | mmu-miR-1187 | 22/23 | Contig200 | + | 50-72 | 457107-457187 | 0.961349 | Ortholog | 1/43 | 40/1248 |
11 | calJac1-504 | Callithrix jacchus | mmu-miR-1187 | 22/23 | Contig4997 | - | 13-35 | 33424-33507 | 0.84961 | Ortholog | 1/43 | 40/1248 |
12 | calJac1-647 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig8596 | - | 15-35 | 29566-29649 | 0.995881 | Ortholog | 1/43 | 40/1248 |
13 | calJac1-664 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig9775 | + | 33-53 | 53062-53160 | 0.938831 | Ortholog | 1/43 | 40/1248 |
14 | calJac1-426 | Callithrix jacchus | mmu-miR-1187 | 22/23 | Contig3717 | + | 49-71 | 17255-17336 | 0.93081 | Ortholog | 1/43 | 40/1248 |
15 | calJac1-361 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig2899 | + | 48-69 | 148829-148931 | 0.843131 | Ortholog | 1/43 | 40/1248 |
16 | calJac1-636 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig79 | - | 47-68 | 553469-553567 | 0.845499 | Ortholog | 1/43 | 40/1248 |
17 | calJac1-660 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig9272 | + | 38-59 | 55770-55876 | 0.988436 | Ortholog | 1/43 | 40/1248 |
18 | calJac1-530 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig5262 | - | 48-69 | 187411-187511 | 0.940027 | Ortholog | 1/43 | 40/1248 |
19 | calJac1-579 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig6397 | - | 32-53 | 88152-88253 | 0.991157 | Ortholog | 1/43 | 40/1248 |
20 | calJac1-348 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig2784 | + | 27-48 | 75138-75205 | 0.856515 | Ortholog | 1/43 | 40/1248 |
21 | calJac1-12 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig10359 | - | 40-61 | 56281-56389 | 0.98562 | Ortholog | 1/43 | 40/1248 |
22 | calJac1-28 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig1092 | + | 46-67 | 332522-332612 | 0.950545 | Ortholog | 1/43 | 40/1248 |
23 | calJac1-46 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig12273 | + | 47-68 | 21804-21878 | 0.967878 | Ortholog | 1/43 | 40/1248 |
24 | calJac1-343 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig266 | - | 49-70 | 30672-30758 | 0.999359 | Ortholog | 1/43 | 40/1248 |
25 | calJac1-14 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig10426 | - | 49-70 | 6072-6156 | 0.940145 | Ortholog | 1/43 | 40/1248 |
26 | calJac1-371 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig3058 | + | 9-30 | 6293-6369 | 0.99968 | Ortholog | 1/43 | 40/1248 |
27 | calJac1-79 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig13857 | + | 36-57 | 11233-11332 | 0.801754 | Ortholog | 1/43 | 40/1248 |
28 | calJac1-390 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig3437 | - | 33-54 | 138371-138474 | 0.811959 | Ortholog | 1/43 | 40/1248 |
29 | calJac1-89 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig1436 | - | 19-40 | 33740-33828 | 0.910006 | Ortholog | 1/43 | 40/1248 |
30 | calJac1-41 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig11830 | + | 49-70 | 40607-40716 | 0.909467 | Ortholog | 1/43 | 40/1248 |
31 | calJac1-483 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig4630 | + | 42-63 | 162045-162154 | 0.83794 | Ortholog | 1/43 | 40/1248 |
32 | calJac1-333 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig2614 | + | 20-41 | 48806-48892 | 0.81124 | Ortholog | 1/43 | 40/1248 |
33 | calJac1-548 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig5408 | + | 51-72 | 138569-138640 | 0.872546 | Ortholog | 1/43 | 40/1248 |
34 | calJac1-243 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig2192 | + | 28-49 | 172113-172209 | 0.985446 | Ortholog | 1/43 | 40/1248 |
35 | calJac1-165 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig183 | + | 27-48 | 1044715-1044810 | 0.993515 | Ortholog | 1/43 | 40/1248 |
36 | calJac1-162 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig17775 | + | 10-31 | 10491-10558 | 0.995207 | Ortholog | 1/43 | 40/1248 |
37 | calJac1-76 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig1360 | + | 25-46 | 140397-140448 | 0.992062 | Ortholog | 1/43 | 40/1248 |
38 | calJac1-60 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig12939 | - | 25-46 | 13801-13896 | 0.991318 | Ortholog | 1/43 | 40/1248 |
39 | calJac1-158 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig1718 | - | 25-46 | 227983-228057 | 0.991591 | Ortholog | 1/43 | 40/1248 |
40 | calJac1-645 | Callithrix jacchus | mmu-miR-1187 | 21/23 | Contig8117 | - | 47-68 | 41941-42026 | 0.831358 | Ortholog | 1/43 | 40/1248 |
Total | 40 record(s). |