- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fr2-86 | Fugu rubripes | cel-miR-124 | 21/21 | chrUn | + | 51-71 | 168147655-168147736 | 0.863833 | Paralog | 47/65 | 8/135 |
2 | fr2-278 | Fugu rubripes | cel-miR-124 | 21/21 | chrUn | - | 50-70 | 192083560-192083640 | 0.812938 | Paralog | 47/65 | 8/135 |
3 | fr2-161 | Fugu rubripes | cel-miR-124 | 21/21 | chrUn | + | 51-71 | 373437207-373437288 | 0.863833 | Paralog | 47/65 | 8/135 |
4 | fr2-86 | Fugu rubripes | dme-miR-124 | 23/23 | chrUn | + | 50-72 | 168147656-168147735 | 0.883996 | Paralog | 47/65 | 8/135 |
5 | fr2-161 | Fugu rubripes | dme-miR-124 | 23/23 | chrUn | + | 50-72 | 373437208-373437287 | 0.883996 | Paralog | 47/65 | 8/135 |
6 | fr2-255 | Fugu rubripes | gga-miR-124a | 22/22 | chrUn | - | 49-70 | 146761021-146761099 | 0.836344 | Paralog | 47/65 | 8/135 |
7 | fr2-86 | Fugu rubripes | gga-miR-124a | 22/22 | chrUn | + | 50-71 | 168147655-168147736 | 0.938191 | Paralog | 47/65 | 8/135 |
8 | fr2-278 | Fugu rubripes | gga-miR-124a | 22/22 | chrUn | - | 49-70 | 192083560-192083640 | 0.911392 | Paralog | 47/65 | 8/135 |
9 | fr2-161 | Fugu rubripes | gga-miR-124a | 22/22 | chrUn | + | 50-71 | 373437207-373437288 | 0.938191 | Paralog | 47/65 | 8/135 |
10 | fr2-255 | Fugu rubripes | bta-miR-124a | 23/23 | chrUn | - | 49-71 | 146761021-146761099 | 0.884458 | Paralog | 47/65 | 8/135 |
11 | fr2-86 | Fugu rubripes | bta-miR-124a | 23/23 | chrUn | + | 50-72 | 168147655-168147736 | 0.961937 | Paralog | 47/65 | 8/135 |
12 | fr2-278 | Fugu rubripes | bta-miR-124a | 23/23 | chrUn | - | 49-71 | 192083560-192083640 | 0.940858 | Paralog | 47/65 | 8/135 |
13 | fr2-161 | Fugu rubripes | bta-miR-124a | 23/23 | chrUn | + | 50-72 | 373437207-373437288 | 0.961937 | Paralog | 47/65 | 8/135 |
14 | fr2-86 | Fugu rubripes | sme-miR-124a | 19/21 | chrUn | + | 51-69 | 168147655-168147736 | 0.850798 | Paralog | 47/65 | 8/135 |
15 | fr2-278 | Fugu rubripes | sme-miR-124a | 19/21 | chrUn | - | 51-69 | 192083559-192083641 | 0.800355 | Paralog | 47/65 | 8/135 |
16 | fr2-161 | Fugu rubripes | sme-miR-124a | 19/21 | chrUn | + | 51-69 | 373437207-373437288 | 0.850798 | Paralog | 47/65 | 8/135 |
17 | fr2-255 | Fugu rubripes | odi-miR-124a | 21/22 | chrUn | - | 49-70 | 146761021-146761098 | 0.808049 | Paralog | 47/65 | 8/135 |
18 | fr2-86 | Fugu rubripes | odi-miR-124a | 21/22 | chrUn | + | 51-72 | 168147655-168147736 | 0.922377 | Paralog | 47/65 | 8/135 |
19 | fr2-278 | Fugu rubripes | odi-miR-124a | 21/22 | chrUn | - | 49-70 | 192083561-192083639 | 0.896617 | Paralog | 47/65 | 8/135 |
20 | fr2-161 | Fugu rubripes | odi-miR-124a | 21/22 | chrUn | + | 51-72 | 373437207-373437288 | 0.922377 | Paralog | 47/65 | 8/135 |
21 | fr2-86 | Fugu rubripes | mmu-miR-124* | 22/22 | chrUn | + | 14-35 | 168147655-168147736 | 0.952016 | Paralog | 47/65 | 8/135 |
22 | fr2-278 | Fugu rubripes | mmu-miR-124* | 22/22 | chrUn | - | 16-37 | 192083559-192083645 | 0.8698 | Paralog | 47/65 | 8/135 |
23 | fr2-161 | Fugu rubripes | mmu-miR-124* | 22/22 | chrUn | + | 14-35 | 373437207-373437288 | 0.952016 | Paralog | 47/65 | 8/135 |
24 | fr2-24 | Fugu rubripes | mmu-miR-124* | 20/22 | chrUn | + | 17-37 | 36860451-36860536 | 0.956114 | Paralog | 47/65 | 8/135 |
25 | fr2-255 | Fugu rubripes | sko-miR-124* | 20/22 | chrUn | - | 17-37 | 146761017-146761103 | 0.839318 | Paralog | 47/65 | 8/135 |
26 | fr2-86 | Fugu rubripes | sko-miR-124* | 20/22 | chrUn | + | 15-35 | 168147655-168147736 | 0.975517 | Paralog | 47/65 | 8/135 |
27 | fr2-278 | Fugu rubripes | sko-miR-124* | 20/22 | chrUn | - | 17-37 | 192083559-192083645 | 0.95416 | Paralog | 47/65 | 8/135 |
28 | fr2-161 | Fugu rubripes | sko-miR-124* | 20/22 | chrUn | + | 15-35 | 373437207-373437288 | 0.975517 | Paralog | 47/65 | 8/135 |
29 | fru-mir-124-3 | Fugu rubripes | fru-miR-124 | 22/22 | scaffold_10 | + | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 8/135 |
30 | fru-mir-124-1 | Fugu rubripes | fru-miR-124 | 22/22 | scaffold_95 | + | 51-72 | N/A | - | miRBase_13_0 | 47/65 | 8/135 |
31 | fru-mir-124-2 | Fugu rubripes | fru-miR-124 | 22/22 | scaffold_120 | - | 52-73 | N/A | - | miRBase_13_0 | 47/65 | 8/135 |
Total | 31 record(s). |