- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fr2-335 | Fugu rubripes | fru-miR-133 | 22/22 | chrUn | - | 49-70 | 361389127-361389206 | 0.977328 | Paralog | 47/64 | 4/138 |
2 | fr2-62 | Fugu rubripes | dme-miR-133 | 22/22 | chrUn | + | 51-72 | 138511901-138511982 | 0.983414 | Paralog | 47/64 | 4/138 |
3 | fr2-335 | Fugu rubripes | dme-miR-133 | 22/22 | chrUn | - | 49-70 | 361389128-361389205 | 0.987008 | Paralog | 47/64 | 4/138 |
4 | fr2-62 | Fugu rubripes | ppy-miR-133a | 19/21 | chrUn | + | 52-70 | 138511903-138511980 | 0.961284 | Paralog | 47/64 | 4/138 |
5 | fr2-62 | Fugu rubripes | sme-miR-133 | 18/20 | chrUn | + | 51-69 | 138511900-138511981 | 0.958857 | Paralog | 47/64 | 4/138 |
6 | fr2-335 | Fugu rubripes | sme-miR-133 | 18/20 | chrUn | - | 51-69 | 361389126-361389207 | 0.935452 | Paralog | 47/64 | 4/138 |
7 | fr2-62 | Fugu rubripes | cin-miR-133 | 21/21 | chrUn | + | 51-71 | 138511901-138511982 | 0.968878 | Paralog | 47/64 | 4/138 |
8 | fr2-335 | Fugu rubripes | cin-miR-133 | 21/21 | chrUn | - | 50-70 | 361389127-361389206 | 0.957359 | Paralog | 47/64 | 4/138 |
9 | fr2-62 | Fugu rubripes | bfl-miR-133 | 22/22 | chrUn | + | 50-71 | 138511903-138511980 | 0.981709 | Paralog | 47/64 | 4/138 |
10 | fr2-62 | Fugu rubripes | spu-miR-133 | 22/23 | chrUn | + | 51-73 | 138511901-138511982 | 0.989838 | Paralog | 47/64 | 4/138 |
11 | fr2-335 | Fugu rubripes | spu-miR-133 | 22/23 | chrUn | - | 49-71 | 361389127-361389206 | 0.986369 | Paralog | 47/64 | 4/138 |
12 | fr2-62 | Fugu rubripes | mmu-miR-133a* | 21/21 | chrUn | + | 15-35 | 138511900-138511983 | 0.992606 | Paralog | 47/64 | 4/138 |
13 | fr2-335 | Fugu rubripes | mmu-miR-133a* | 21/21 | chrUn | - | 15-35 | 361389125-361389208 | 0.994569 | Paralog | 47/64 | 4/138 |
14 | fr2-62 | Fugu rubripes | dre-miR-133a* | 22/22 | chrUn | + | 14-35 | 138511900-138511982 | 0.990847 | Paralog | 47/64 | 4/138 |
15 | fr2-335 | Fugu rubripes | dre-miR-133a* | 22/22 | chrUn | - | 14-35 | 361389125-361389208 | 0.993607 | Paralog | 47/64 | 4/138 |
16 | fr2-251 | Fugu rubripes | oan-miR-133b* | 22/22 | chrUn | - | 11-32 | 142901623-142901701 | 0.889068 | Paralog | 47/64 | 4/138 |
17 | fru-mir-133 | Fugu rubripes | fru-miR-133 | 22/22 | scaffold_2477 | - | 52-73 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
Total | 17 record(s). |