- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | gasAcu1-79 | Gasterosteus aculeatus | mmu-miR-133a | 22/22 | chrIII | + | 51-72 | 13606875-13606958 | 0.972578 | Ortholog | 47/64 | 3/138 |
2 | gasAcu1-481 | Gasterosteus aculeatus | mmu-miR-133a | 22/22 | chrXII | - | 49-70 | 2437681-2437760 | 0.980907 | Ortholog | 47/64 | 3/138 |
3 | gasAcu1-644 | Gasterosteus aculeatus | mmu-miR-133a | 21/22 | chrXVIII | + | 51-71 | 10692598-10692679 | 0.960189 | Ortholog | 47/64 | 3/138 |
4 | gasAcu1-79 | Gasterosteus aculeatus | dme-miR-133 | 22/22 | chrIII | + | 51-72 | 13606876-13606957 | 0.983414 | Ortholog | 47/64 | 3/138 |
5 | gasAcu1-481 | Gasterosteus aculeatus | dme-miR-133 | 22/22 | chrXII | - | 49-70 | 2437682-2437759 | 0.983646 | Ortholog | 47/64 | 3/138 |
6 | gasAcu1-644 | Gasterosteus aculeatus | mmu-miR-133b | 22/22 | chrXVIII | + | 51-72 | 10692598-10692679 | 0.974972 | Ortholog | 47/64 | 3/138 |
7 | gasAcu1-79 | Gasterosteus aculeatus | ppy-miR-133a | 19/21 | chrIII | + | 52-70 | 13606878-13606955 | 0.961284 | Ortholog | 47/64 | 3/138 |
8 | gasAcu1-481 | Gasterosteus aculeatus | ppy-miR-133a | 19/21 | chrXII | - | 51-69 | 2437683-2437758 | 0.973418 | Ortholog | 47/64 | 3/138 |
9 | gasAcu1-79 | Gasterosteus aculeatus | sme-miR-133 | 18/20 | chrIII | + | 52-70 | 13606875-13606958 | 0.937056 | Ortholog | 47/64 | 3/138 |
10 | gasAcu1-644 | Gasterosteus aculeatus | sme-miR-133 | 18/20 | chrXVIII | + | 52-70 | 10692598-10692679 | 0.887217 | Ortholog | 47/64 | 3/138 |
11 | gasAcu1-481 | Gasterosteus aculeatus | sme-miR-133 | 18/20 | chrXII | - | 51-69 | 2437680-2437761 | 0.941883 | Ortholog | 47/64 | 3/138 |
12 | gasAcu1-79 | Gasterosteus aculeatus | cin-miR-133 | 21/21 | chrIII | + | 51-71 | 13606876-13606957 | 0.968878 | Ortholog | 47/64 | 3/138 |
13 | gasAcu1-481 | Gasterosteus aculeatus | cin-miR-133 | 21/21 | chrXII | - | 50-70 | 2437681-2437760 | 0.963721 | Ortholog | 47/64 | 3/138 |
14 | gasAcu1-644 | Gasterosteus aculeatus | cin-miR-133 | 20/21 | chrXVIII | + | 52-71 | 10692598-10692679 | 0.936841 | Ortholog | 47/64 | 3/138 |
15 | gasAcu1-79 | Gasterosteus aculeatus | bfl-miR-133 | 22/22 | chrIII | + | 50-71 | 13606878-13606955 | 0.981709 | Ortholog | 47/64 | 3/138 |
16 | gasAcu1-481 | Gasterosteus aculeatus | bfl-miR-133 | 22/22 | chrXII | - | 49-70 | 2437683-2437758 | 0.986625 | Ortholog | 47/64 | 3/138 |
17 | gasAcu1-79 | Gasterosteus aculeatus | spu-miR-133 | 22/23 | chrIII | + | 50-72 | 13606876-13606957 | 0.989975 | Ortholog | 47/64 | 3/138 |
18 | gasAcu1-481 | Gasterosteus aculeatus | spu-miR-133 | 22/23 | chrXII | - | 49-71 | 2437681-2437760 | 0.988612 | Ortholog | 47/64 | 3/138 |
19 | gasAcu1-79 | Gasterosteus aculeatus | mmu-miR-133a* | 21/21 | chrIII | + | 15-35 | 13606875-13606958 | 0.992606 | Ortholog | 47/64 | 3/138 |
20 | gasAcu1-481 | Gasterosteus aculeatus | mmu-miR-133a* | 21/21 | chrXII | - | 15-35 | 2437679-2437762 | 0.995447 | Ortholog | 47/64 | 3/138 |
21 | gasAcu1-79 | Gasterosteus aculeatus | dre-miR-133a* | 22/22 | chrIII | + | 14-35 | 13606875-13606957 | 0.990847 | Ortholog | 47/64 | 3/138 |
22 | gasAcu1-481 | Gasterosteus aculeatus | dre-miR-133a* | 22/22 | chrXII | - | 14-35 | 2437679-2437762 | 0.994593 | Ortholog | 47/64 | 3/138 |
23 | gasAcu1-644 | Gasterosteus aculeatus | oan-miR-133b* | 22/22 | chrXVIII | + | 15-36 | 10692596-10692679 | 0.843611 | Ortholog | 47/64 | 3/138 |
Total | 23 record(s). |