- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | monDom4-231 | Monodelphis domestica | mmu-miR-133a | 22/22 | chr3 | + | 51-72 | 263368066-263368149 | 0.968384 | Paralog | 47/64 | 4/138 |
2 | monDom4-87 | Monodelphis domestica | mmu-miR-133a | 22/22 | chr1 | - | 49-70 | 476650611-476650690 | 0.984545 | Paralog | 47/64 | 4/138 |
3 | monDom4-139 | Monodelphis domestica | mmu-miR-133a | 21/22 | chr2 | + | 51-71 | 300507709-300507793 | 0.994646 | Paralog | 47/64 | 4/138 |
4 | monDom4-231 | Monodelphis domestica | mdo-miR-133a | 22/22 | chr3 | + | 51-72 | 263368067-263368148 | 0.977089 | Paralog | 47/64 | 4/138 |
5 | monDom4-87 | Monodelphis domestica | mdo-miR-133a | 22/22 | chr1 | - | 49-70 | 476650612-476650689 | 0.986672 | Paralog | 47/64 | 4/138 |
6 | monDom4-139 | Monodelphis domestica | mmu-miR-133b | 22/22 | chr2 | + | 51-72 | 300507709-300507793 | 0.997107 | Paralog | 47/64 | 4/138 |
7 | monDom4-139 | Monodelphis domestica | gga-miR-133b | 21/21 | chr2 | + | 51-71 | 300507710-300507791 | 0.994854 | Paralog | 47/64 | 4/138 |
8 | monDom4-231 | Monodelphis domestica | ppy-miR-133a | 19/21 | chr3 | + | 52-70 | 263368069-263368146 | 0.961284 | Paralog | 47/64 | 4/138 |
9 | monDom4-87 | Monodelphis domestica | ppy-miR-133a | 19/21 | chr1 | - | 51-69 | 476650613-476650688 | 0.977791 | Paralog | 47/64 | 4/138 |
10 | monDom4-231 | Monodelphis domestica | cin-miR-133 | 21/21 | chr3 | + | 51-71 | 263368067-263368148 | 0.955596 | Paralog | 47/64 | 4/138 |
11 | monDom4-87 | Monodelphis domestica | cin-miR-133 | 21/21 | chr1 | - | 50-70 | 476650611-476650690 | 0.970395 | Paralog | 47/64 | 4/138 |
12 | monDom4-139 | Monodelphis domestica | cin-miR-133 | 20/21 | chr2 | + | 52-71 | 300507709-300507793 | 0.990135 | Paralog | 47/64 | 4/138 |
13 | monDom4-231 | Monodelphis domestica | bfl-miR-133 | 22/22 | chr3 | + | 51-72 | 263368068-263368147 | 0.979021 | Paralog | 47/64 | 4/138 |
14 | monDom4-87 | Monodelphis domestica | bfl-miR-133 | 22/22 | chr1 | - | 49-70 | 476650613-476650688 | 0.989039 | Paralog | 47/64 | 4/138 |
15 | monDom4-231 | Monodelphis domestica | spu-miR-133 | 22/23 | chr3 | + | 50-72 | 263368067-263368148 | 0.986617 | Paralog | 47/64 | 4/138 |
16 | monDom4-87 | Monodelphis domestica | spu-miR-133 | 22/23 | chr1 | - | 49-71 | 476650611-476650690 | 0.990825 | Paralog | 47/64 | 4/138 |
17 | monDom4-231 | Monodelphis domestica | mmu-miR-133a* | 21/21 | chr3 | + | 15-35 | 263368066-263368149 | 0.995447 | Paralog | 47/64 | 4/138 |
18 | monDom4-87 | Monodelphis domestica | mmu-miR-133a* | 20/21 | chr1 | - | 15-35 | 476650609-476650692 | 0.990994 | Paralog | 47/64 | 4/138 |
19 | monDom4-231 | Monodelphis domestica | dre-miR-133a* | 22/22 | chr3 | + | 13-34 | 263368067-263368148 | 0.993689 | Paralog | 47/64 | 4/138 |
20 | monDom4-87 | Monodelphis domestica | dre-miR-133a* | 21/22 | chr1 | - | 14-35 | 476650609-476650692 | 0.989362 | Paralog | 47/64 | 4/138 |
21 | monDom4-139 | Monodelphis domestica | oan-miR-133b* | 22/22 | chr2 | + | 13-34 | 300507710-300507791 | 0.985784 | Paralog | 47/64 | 4/138 |
22 | mdo-mir-133a | Monodelphis domestica | mdo-miR-133a | 22/22 | chr3 | + | 53-74 | N/A | - | miRBase_13_0 | 47/64 | 4/138 |
Total | 22 record(s). |