- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | ponAbe2-488 | Pongo abelii | mmu-miR-133a | 22/22 | chr20 | + | 51-72 | 60896514-60896597 | 0.988494 | Ortholog | 47/64 | 4/138 |
2 | ponAbe2-503 | Pongo abelii | mmu-miR-133a | 22/22 | chr20_random | + | 51-72 | 4561064-4561147 | 0.988494 | Ortholog | 47/64 | 4/138 |
3 | ponAbe2-337 | Pongo abelii | mmu-miR-133a | 22/22 | chr18_random | - | 49-70 | 65354-65433 | 0.989867 | Ortholog | 47/64 | 4/138 |
4 | ponAbe2-647 | Pongo abelii | mmu-miR-133a | 21/22 | chr6 | + | 51-71 | 52486833-52486917 | 0.996518 | Ortholog | 47/64 | 4/138 |
5 | ponAbe2-488 | Pongo abelii | dme-miR-133 | 22/22 | chr20 | + | 51-72 | 60896515-60896596 | 0.991346 | Ortholog | 47/64 | 4/138 |
6 | ponAbe2-503 | Pongo abelii | dme-miR-133 | 22/22 | chr20_random | + | 51-72 | 4561065-4561146 | 0.991346 | Ortholog | 47/64 | 4/138 |
7 | ponAbe2-337 | Pongo abelii | dme-miR-133 | 22/22 | chr18_random | - | 49-70 | 65355-65432 | 0.991103 | Ortholog | 47/64 | 4/138 |
8 | ponAbe2-647 | Pongo abelii | mmu-miR-133b | 22/22 | chr6 | + | 51-72 | 52486833-52486917 | 0.998135 | Ortholog | 47/64 | 4/138 |
9 | ponAbe2-647 | Pongo abelii | gga-miR-133b | 21/21 | chr6 | + | 51-71 | 52486834-52486916 | 0.996819 | Ortholog | 47/64 | 4/138 |
10 | ponAbe2-337 | Pongo abelii | ppy-miR-133a | 19/21 | chr18_random | - | 51-69 | 65356-65431 | 0.983117 | Ortholog | 47/64 | 4/138 |
11 | ponAbe2-488 | Pongo abelii | cin-miR-133 | 21/21 | chr20 | + | 51-71 | 60896515-60896596 | 0.982726 | Ortholog | 47/64 | 4/138 |
12 | ponAbe2-503 | Pongo abelii | cin-miR-133 | 21/21 | chr20_random | + | 51-71 | 4561065-4561146 | 0.982726 | Ortholog | 47/64 | 4/138 |
13 | ponAbe2-337 | Pongo abelii | cin-miR-133 | 21/21 | chr18_random | - | 50-70 | 65354-65433 | 0.980288 | Ortholog | 47/64 | 4/138 |
14 | ponAbe2-647 | Pongo abelii | cin-miR-133 | 20/21 | chr6 | + | 52-71 | 52486833-52486917 | 0.993595 | Ortholog | 47/64 | 4/138 |
15 | ponAbe2-488 | Pongo abelii | bfl-miR-133 | 22/22 | chr20 | + | 51-72 | 60896516-60896595 | 0.991685 | Ortholog | 47/64 | 4/138 |
16 | ponAbe2-503 | Pongo abelii | bfl-miR-133 | 22/22 | chr20_random | + | 51-72 | 4561066-4561145 | 0.991685 | Ortholog | 47/64 | 4/138 |
17 | ponAbe2-337 | Pongo abelii | bfl-miR-133 | 22/22 | chr18_random | - | 49-70 | 65356-65431 | 0.992195 | Ortholog | 47/64 | 4/138 |
18 | ponAbe2-488 | Pongo abelii | spu-miR-133 | 22/23 | chr20 | + | 50-72 | 60896515-60896596 | 0.995032 | Ortholog | 47/64 | 4/138 |
19 | ponAbe2-503 | Pongo abelii | spu-miR-133 | 22/23 | chr20_random | + | 50-72 | 4561065-4561146 | 0.995032 | Ortholog | 47/64 | 4/138 |
20 | ponAbe2-337 | Pongo abelii | spu-miR-133 | 22/23 | chr18_random | - | 49-71 | 65354-65433 | 0.994057 | Ortholog | 47/64 | 4/138 |
21 | ponAbe2-337 | Pongo abelii | mmu-miR-133a* | 21/21 | chr18_random | - | 16-36 | 65351-65436 | 0.998095 | Ortholog | 47/64 | 4/138 |
22 | ponAbe2-337 | Pongo abelii | dre-miR-133a* | 22/22 | chr18_random | - | 15-36 | 65351-65436 | 0.997732 | Ortholog | 47/64 | 4/138 |
23 | ponAbe2-647 | Pongo abelii | oan-miR-133b* | 22/22 | chr6 | + | 15-36 | 52486832-52486915 | 0.990547 | Ortholog | 47/64 | 4/138 |
Total | 23 record(s). |