- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | strPur2-59 | Strongylocentrotus purpuratus | mmu-miR-133a | 20/22 | Scaffold4906 | + | 52-71 | 363029-363112 | 0.985986 | Paralog | 47/64 | 2/138 |
2 | strPur2-59 | Strongylocentrotus purpuratus | dme-miR-133 | 21/22 | Scaffold4906 | + | 51-72 | 363031-363110 | 0.969902 | Paralog | 47/64 | 2/138 |
3 | strPur2-59 | Strongylocentrotus purpuratus | cin-miR-133 | 19/21 | Scaffold4906 | + | 52-70 | 363030-363111 | 0.976422 | Paralog | 47/64 | 2/138 |
4 | strPur2-59 | Strongylocentrotus purpuratus | bfl-miR-133 | 21/22 | Scaffold4906 | + | 51-72 | 363032-363109 | 0.931588 | Paralog | 47/64 | 2/138 |
5 | strPur2-59 | Strongylocentrotus purpuratus | spu-miR-133 | 23/23 | Scaffold4906 | + | 50-72 | 363031-363110 | 0.984639 | Paralog | 47/64 | 2/138 |
6 | strPur2-59 | Strongylocentrotus purpuratus | mmu-miR-133a* | 19/21 | Scaffold4906 | + | 13-33 | 363030-363111 | 0.994371 | Paralog | 47/64 | 2/138 |
7 | strPur2-59 | Strongylocentrotus purpuratus | dre-miR-133a* | 20/22 | Scaffold4906 | + | 11-32 | 363031-363110 | 0.986219 | Paralog | 47/64 | 2/138 |
8 | spu-mir-133 | Strongylocentrotus purpuratus | spu-miR-133 | 23/23 | N/A | N/A | 60-82 | N/A | - | miRBase_13_0 | 47/64 | 2/138 |
Total | 8 record(s). |