- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cavPor3-767 | Cavia porcellus | mmu-miR-135a | 23/23 | scaffold_9 | - | 16-38 | 4516682-4516768 | 0.995852 | Ortholog | 21/39 | 3/118 |
2 | cavPor3-742 | Cavia porcellus | mmu-miR-135a | 23/23 | scaffold_8 | - | 14-36 | 27281763-27281846 | 0.999823 | Ortholog | 21/39 | 3/118 |
3 | cavPor3-162 | Cavia porcellus | rno-miR-135b | 23/23 | scaffold_12 | + | 14-36 | 17315907-17315990 | 0.999913 | Ortholog | 21/39 | 3/118 |
4 | cavPor3-162 | Cavia porcellus | mdo-miR-135b | 22/22 | scaffold_12 | + | 13-34 | 17315908-17315989 | 0.999799 | Ortholog | 21/39 | 3/118 |
5 | cavPor3-767 | Cavia porcellus | oan-miR-135a | 21/21 | scaffold_9 | - | 49-69 | 4516683-4516763 | 0.972988 | Ortholog | 21/39 | 3/118 |
6 | cavPor3-767 | Cavia porcellus | cfa-miR-135a-3p | 22/22 | scaffold_9 | - | 49-70 | 4516684-4516762 | 0.981368 | Ortholog | 21/39 | 3/118 |
7 | cavPor3-742 | Cavia porcellus | mmu-miR-135a* | 22/22 | scaffold_8 | - | 49-70 | 27281767-27281842 | 0.981292 | Ortholog | 21/39 | 3/118 |
8 | cavPor3-162 | Cavia porcellus | hsa-miR-135b* | 22/22 | scaffold_12 | + | 51-72 | 17315909-17315990 | 0.999631 | Ortholog | 21/39 | 3/118 |
Total | 8 record(s). |