- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | tetNig1-129 | Tetraodon nigroviridis | mmu-miR-138 | 23/23 | chr21 | - | 14-36 | 4332431-4332515 | 0.997291 | Paralog | 14/29 | 3/56 |
2 | tetNig1-334 | Tetraodon nigroviridis | mmu-miR-138 | 23/23 | chrUn_random | - | 14-36 | 128588645-128588729 | 0.996166 | Paralog | 14/29 | 3/56 |
3 | tetNig1-129 | Tetraodon nigroviridis | gga-miR-138 | 17/17 | chr21 | - | 26-42 | 4332435-4332527 | 0.999104 | Paralog | 14/29 | 3/56 |
4 | tetNig1-334 | Tetraodon nigroviridis | gga-miR-138 | 17/17 | chrUn_random | - | 11-27 | 128588648-128588726 | 0.999482 | Paralog | 14/29 | 3/56 |
5 | tetNig1-129 | Tetraodon nigroviridis | tni-miR-138 | 22/22 | chr21 | - | 14-35 | 4332431-4332515 | 0.998395 | Paralog | 14/29 | 3/56 |
6 | tetNig1-334 | Tetraodon nigroviridis | tni-miR-138 | 22/22 | chrUn_random | - | 14-35 | 128588645-128588729 | 0.99809 | Paralog | 14/29 | 3/56 |
7 | tetNig1-129 | Tetraodon nigroviridis | mmu-miR-138* | 21/22 | chr21 | - | 49-70 | 4332434-4332512 | 0.905039 | Paralog | 14/29 | 3/56 |
8 | tetNig1-334 | Tetraodon nigroviridis | mmu-miR-138* | 21/22 | chrUn_random | - | 49-70 | 128588648-128588725 | 0.996804 | Paralog | 14/29 | 3/56 |
9 | tni-mir-138 | Tetraodon nigroviridis | tni-miR-138 | 22/22 | chr13 | + | 6-27 | N/A | - | miRBase_13_0 | 14/29 | 3/56 |
Total | 9 record(s). |