- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | cavPor3-642 | Cavia porcellus | mmu-miR-142-5p | 21/21 | scaffold_53 | + | 14-34 | 558159-558241 | 0.999629 | Ortholog | 14/30 | 1/45 |
2 | cavPor3-642 | Cavia porcellus | mmu-miR-142-3p | 23/23 | scaffold_53 | + | 50-72 | 558159-558241 | 0.999919 | Ortholog | 14/30 | 1/45 |
3 | cavPor3-642 | Cavia porcellus | gga-miR-142-5p | 22/22 | scaffold_53 | + | 10-31 | 558161-558239 | 0.994023 | Ortholog | 14/30 | 1/45 |
4 | cavPor3-642 | Cavia porcellus | gga-miR-142-3p | 22/22 | scaffold_53 | + | 51-72 | 558158-558242 | 0.999841 | Ortholog | 14/30 | 1/45 |
5 | cavPor3-642 | Cavia porcellus | fru-miR-142b | 22/22 | scaffold_53 | + | 14-35 | 558159-558241 | 0.999492 | Ortholog | 14/30 | 1/45 |
6 | cavPor3-642 | Cavia porcellus | xtr-miR-142-5p | 20/20 | scaffold_53 | + | 13-32 | 558160-558240 | 0.998825 | Ortholog | 14/30 | 1/45 |
7 | cavPor3-642 | Cavia porcellus | cfa-miR-142 | 21/21 | scaffold_53 | + | 10-30 | 558161-558239 | 0.995004 | Ortholog | 14/30 | 1/45 |
8 | cavPor3-642 | Cavia porcellus | bta-miR-142* | 22/22 | scaffold_53 | + | 51-72 | 558161-558239 | 0.999907 | Ortholog | 14/30 | 1/45 |
Total | 8 record(s). |