- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fr2-272 | Fugu rubripes | gga-miR-17-5p | 24/24 | chrUn | - | 20-43 | 176112953-176113044 | 0.997428 | Paralog | 23/41 | 6/78 |
2 | fr2-175 | Fugu rubripes | gga-miR-17-5p | 23/24 | chrUn | - | 14-36 | 21915236-21915320 | 0.994639 | Paralog | 23/41 | 6/78 |
3 | fr2-5 | Fugu rubripes | gga-miR-17-5p | 22/24 | chrUn | + | 22-44 | 5701498-5701589 | 0.996699 | Paralog | 23/41 | 6/78 |
4 | fr2-268 | Fugu rubripes | gga-miR-17-5p | 22/24 | chrUn | - | 19-41 | 176112433-176112520 | 0.999458 | Paralog | 23/41 | 6/78 |
5 | fr2-272 | Fugu rubripes | gga-miR-17-3p | 18/20 | chrUn | - | 50-67 | 176112956-176113038 | 0.991558 | Paralog | 23/41 | 6/78 |
6 | fr2-272 | Fugu rubripes | fru-miR-17 | 22/22 | chrUn | - | 19-40 | 176112954-176113043 | 0.996825 | Paralog | 23/41 | 6/78 |
7 | fr2-5 | Fugu rubripes | fru-miR-17 | 20/22 | chrUn | + | 21-41 | 5701499-5701588 | 0.996939 | Paralog | 23/41 | 6/78 |
8 | fr2-268 | Fugu rubripes | fru-miR-17 | 20/22 | chrUn | - | 19-39 | 176112433-176112520 | 0.999512 | Paralog | 23/41 | 6/78 |
9 | fru-mir-17-1 | Fugu rubripes | fru-miR-17 | 22/22 | scaffold_1 | + | 14-35 | N/A | - | miRBase_13_0 | 23/41 | 6/78 |
10 | fru-mir-17-2 | Fugu rubripes | fru-miR-17 | 22/22 | scaffold_103 | - | 14-35 | N/A | - | miRBase_13_0 | 23/41 | 6/78 |
Total | 10 record(s). |