- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | tetNig1-63 | Tetraodon nigroviridis | tni-miR-181a | 23/23 | chr15 | + | 6-28 | 5035271-5035345 | 0.900868 | Paralog | 22/39 | 6/168 |
2 | tetNig1-63 | Tetraodon nigroviridis | bta-miR-181a | 24/24 | chr15 | + | 6-29 | 5035271-5035345 | 0.951045 | Paralog | 22/39 | 6/168 |
3 | tetNig1-321 | Tetraodon nigroviridis | xtr-miR-181a-1* | 20/22 | chrUn_random | - | 43-63 | 91158984-91159047 | 0.978565 | Paralog | 22/39 | 6/168 |
4 | tetNig1-321 | Tetraodon nigroviridis | xtr-miR-181a-2* | 21/22 | chrUn_random | - | 43-64 | 91158984-91159047 | 0.972203 | Paralog | 22/39 | 6/168 |
5 | tni-mir-181b-2 | Tetraodon nigroviridis | tni-miR-181b | 22/22 | chrUn_random | - | 11-32 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
6 | tni-mir-181b-1 | Tetraodon nigroviridis | tni-miR-181b | 22/22 | chr1 | - | 14-35 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
7 | tni-mir-181a-1 | Tetraodon nigroviridis | tni-miR-181a | 23/23 | chr1 | - | 14-36 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
8 | tni-mir-181a-1 | Tetraodon nigroviridis | tni-miR-181a* | 22/22 | chr1 | - | 55-76 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
9 | tni-mir-181a-2 | Tetraodon nigroviridis | tni-miR-181a | 23/23 | chrUn_random | - | 23-45 | N/A | - | miRBase_13_0 | 22/39 | 6/168 |
Total | 9 record(s). |