- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | galGal3-93 | Gallus gallus | gga-miR-1814 | 20/20 | chrUn_random | + | 52-71 | 24255716-24255796 | 0.912731 | Paralog | 1/42 | 14/174 |
2 | galGal3-97 | Gallus gallus | gga-miR-1814 | 18/20 | chrUn_random | + | 40-57 | 41461689-41461795 | 0.856466 | Paralog | 1/42 | 14/174 |
3 | galGal3-102 | Gallus gallus | gga-miR-1814 | 19/20 | chrUn_random | - | 39-58 | 55734971-55735033 | 0.912445 | Paralog | 1/42 | 14/174 |
4 | galGal3-86 | Gallus gallus | gga-miR-1814 | 19/20 | chr8 | + | 52-70 | 1488819-1488906 | 0.887914 | Paralog | 1/42 | 14/174 |
5 | galGal3-18 | Gallus gallus | gga-miR-1814 | 19/20 | chr10 | - | 51-70 | 8038926-8039018 | 0.87113 | Paralog | 1/42 | 14/174 |
6 | galGal3-104 | Gallus gallus | gga-miR-1814 | 18/20 | chrZ | + | 51-68 | 34548647-34548727 | 0.860281 | Paralog | 1/42 | 14/174 |
7 | galGal3-105 | Gallus gallus | gga-miR-1814 | 19/20 | chrZ | + | 52-71 | 37201544-37201640 | 0.822849 | Paralog | 1/42 | 14/174 |
8 | galGal3-7 | Gallus gallus | gga-miR-1814 | 18/20 | chr1 | - | 40-57 | 7193778-7193885 | 0.870598 | Paralog | 1/42 | 14/174 |
9 | galGal3-8 | Gallus gallus | gga-miR-1814 | 18/20 | chr1 | - | 40-57 | 23084323-23084431 | 0.896318 | Paralog | 1/42 | 14/174 |
10 | galGal3-2 | Gallus gallus | gga-miR-1814 | 19/20 | chr1 | + | 49-68 | 107938688-107938759 | 0.909091 | Paralog | 1/42 | 14/174 |
11 | galGal3-32 | Gallus gallus | gga-miR-1814 | 19/20 | chr2 | + | 27-46 | 55165505-55165599 | 0.813202 | Paralog | 1/42 | 14/174 |
12 | galGal3-34 | Gallus gallus | gga-miR-1814 | 19/20 | chr2 | + | 38-57 | 61163119-61163223 | 0.902113 | Paralog | 1/42 | 14/174 |
13 | galGal3-89 | Gallus gallus | gga-miR-1814 | 19/20 | chr9 | + | 52-71 | 17855871-17855962 | 0.926538 | Paralog | 1/42 | 14/174 |
14 | gga-mir-1814 | Gallus gallus | gga-miR-1814 | 20/20 | chr4 | + | 12-31 | N/A | - | miRBase_13_0 | 1/42 | 14/174 |
Total | 14 record(s). |