- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | danRer5-334 | Danio rerio | dre-miR-199 | 23/23 | Zv7_scaffold2501 | - | 14-36 | 27376-27460 | 0.998727 | Paralog | 22/39 | 5/87 |
2 | danRer5-263 | Danio rerio | dre-miR-199 | 23/23 | chr5 | + | 12-34 | 56949465-56949545 | 0.996508 | Paralog | 22/39 | 5/87 |
3 | danRer5-334 | Danio rerio | mmu-miR-199a-3p | 22/22 | Zv7_scaffold2501 | - | 49-70 | 27380-27456 | 0.999916 | Paralog | 22/39 | 5/87 |
4 | danRer5-263 | Danio rerio | mmu-miR-199a-3p | 22/22 | chr5 | + | 51-72 | 56949465-56949545 | 0.999912 | Paralog | 22/39 | 5/87 |
5 | danRer5-334 | Danio rerio | bta-miR-199a-5p | 22/22 | Zv7_scaffold2501 | - | 14-35 | 27376-27460 | 0.999332 | Paralog | 22/39 | 5/87 |
6 | danRer5-263 | Danio rerio | bta-miR-199a-5p | 22/22 | chr5 | + | 12-33 | 56949465-56949545 | 0.998307 | Paralog | 22/39 | 5/87 |
7 | danRer5-334 | Danio rerio | oan-miR-199 | 21/21 | Zv7_scaffold2501 | - | 50-70 | 27379-27457 | 0.999926 | Paralog | 22/39 | 5/87 |
8 | danRer5-263 | Danio rerio | oan-miR-199 | 21/21 | chr5 | + | 51-71 | 56949465-56949545 | 0.999874 | Paralog | 22/39 | 5/87 |
9 | danRer5-334 | Danio rerio | gga-miR-199* | 20/20 | Zv7_scaffold2501 | - | 50-69 | 27378-27458 | 0.99992 | Paralog | 22/39 | 5/87 |
10 | danRer5-263 | Danio rerio | gga-miR-199* | 20/20 | chr5 | + | 52-71 | 56949463-56949548 | 0.999824 | Paralog | 22/39 | 5/87 |
11 | danRer5-334 | Danio rerio | dre-miR-199* | 22/22 | Zv7_scaffold2501 | - | 49-70 | 27379-27457 | 0.999944 | Paralog | 22/39 | 5/87 |
12 | danRer5-263 | Danio rerio | dre-miR-199* | 22/22 | chr5 | + | 51-72 | 56949464-56949547 | 0.999906 | Paralog | 22/39 | 5/87 |
13 | dre-mir-199-1 | Danio rerio | dre-miR-199 | 23/23 | chr20 | - | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
14 | dre-mir-199-1 | Danio rerio | dre-miR-199* | 22/22 | chr20 | - | 53-74 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
15 | dre-mir-199-2 | Danio rerio | dre-miR-199 | 23/23 | Zv7_scaffold2501 | - | 30-52 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
16 | dre-mir-199-2 | Danio rerio | dre-miR-199* | 22/22 | Zv7_scaffold2501 | - | 68-89 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
17 | dre-mir-199-3 | Danio rerio | dre-miR-199 | 23/23 | chr3 | + | 16-38 | N/A | - | miRBase_13_0 | 22/39 | 5/87 |
Total | 17 record(s). |