- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fr2-31 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | + | 12-34 | 45694177-45694257 | 0.995279 | Paralog | 22/39 | 7/87 |
2 | fr2-33 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | + | 13-35 | 75433364-75433446 | 0.996967 | Paralog | 22/39 | 7/87 |
3 | fr2-286 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | - | 14-36 | 208426833-208426917 | 0.987802 | Paralog | 22/39 | 7/87 |
4 | fr2-150 | Fugu rubripes | fru-miR-199 | 23/23 | chrUn | + | 12-34 | 306940395-306940475 | 0.995775 | Paralog | 22/39 | 7/87 |
5 | fr2-286 | Fugu rubripes | mmu-miR-199a-3p | 22/22 | chrUn | - | 49-70 | 208426837-208426913 | 0.999602 | Paralog | 22/39 | 7/87 |
6 | fr2-150 | Fugu rubripes | mmu-miR-199a-3p | 22/22 | chrUn | + | 51-72 | 306940395-306940475 | 0.999895 | Paralog | 22/39 | 7/87 |
7 | fr2-31 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | + | 12-33 | 45694177-45694257 | 0.997407 | Paralog | 22/39 | 7/87 |
8 | fr2-33 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | + | 10-31 | 75433367-75433443 | 0.998036 | Paralog | 22/39 | 7/87 |
9 | fr2-286 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | - | 14-35 | 208426833-208426917 | 0.993752 | Paralog | 22/39 | 7/87 |
10 | fr2-150 | Fugu rubripes | bta-miR-199a-5p | 22/22 | chrUn | + | 12-33 | 306940395-306940475 | 0.99794 | Paralog | 22/39 | 7/87 |
11 | fr2-150 | Fugu rubripes | oan-miR-199 | 21/21 | chrUn | + | 51-71 | 306940395-306940475 | 0.999849 | Paralog | 22/39 | 7/87 |
12 | fr2-150 | Fugu rubripes | gga-miR-199* | 20/20 | chrUn | + | 52-71 | 306940393-306940478 | 0.999782 | Paralog | 22/39 | 7/87 |
13 | fr2-286 | Fugu rubripes | gga-miR-199* | 19/20 | chrUn | - | 51-69 | 208426834-208426915 | 0.998484 | Paralog | 22/39 | 7/87 |
14 | fr2-150 | Fugu rubripes | dre-miR-199* | 22/22 | chrUn | + | 51-72 | 306940394-306940477 | 0.999888 | Paralog | 22/39 | 7/87 |
15 | fr2-286 | Fugu rubripes | dre-miR-199* | 21/22 | chrUn | - | 50-70 | 208426836-208426914 | 0.999513 | Paralog | 22/39 | 7/87 |
16 | fru-mir-199-3 | Fugu rubripes | fru-miR-199 | 23/23 | scaffold_139 | - | 17-39 | N/A | - | miRBase_13_0 | 22/39 | 7/87 |
17 | fru-mir-199-2 | Fugu rubripes | fru-miR-199 | 23/23 | scaffold_27 | + | 8-30 | N/A | - | miRBase_13_0 | 22/39 | 7/87 |
18 | fru-mir-199-1 | Fugu rubripes | fru-miR-199 | 23/23 | scaffold_13 | + | 15-37 | N/A | - | miRBase_13_0 | 22/39 | 7/87 |
Total | 18 record(s). |