- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | loxAfr1-221 | Loxodonta africana | mmu-miR-199a-5p | 23/23 | scaffold_3922 | + | 12-34 | N/A | 0.995716 | Ortholog | 22/39 | 2/87 |
2 | loxAfr1-181 | Loxodonta africana | mmu-miR-199a-5p | 23/23 | scaffold_3233 | - | 12-34 | N/A | 0.995846 | Ortholog | 22/39 | 2/87 |
3 | loxAfr1-221 | Loxodonta africana | mmu-miR-199a-3p | 22/22 | scaffold_3922 | + | 51-72 | N/A | 0.999876 | Ortholog | 22/39 | 2/87 |
4 | loxAfr1-221 | Loxodonta africana | bta-miR-199a-5p | 22/22 | scaffold_3922 | + | 12-33 | N/A | 0.997879 | Ortholog | 22/39 | 2/87 |
5 | loxAfr1-181 | Loxodonta africana | bta-miR-199a-5p | 22/22 | scaffold_3233 | - | 12-33 | N/A | 0.997746 | Ortholog | 22/39 | 2/87 |
6 | loxAfr1-221 | Loxodonta africana | oan-miR-199 | 21/21 | scaffold_3922 | + | 51-71 | N/A | 0.999837 | Ortholog | 22/39 | 2/87 |
7 | loxAfr1-221 | Loxodonta africana | gga-miR-199* | 20/20 | scaffold_3922 | + | 52-71 | N/A | 0.999733 | Ortholog | 22/39 | 2/87 |
8 | loxAfr1-221 | Loxodonta africana | dre-miR-199* | 22/22 | scaffold_3922 | + | 51-72 | N/A | 0.999883 | Ortholog | 22/39 | 2/87 |
Total | 8 record(s). |