- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | loxAfr1-12 | Loxodonta africana | hsa-miR-20a | 23/23 | scaffold_103976 | - | 19-41 | N/A | 0.993563 | Ortholog | 24/42 | 2/98 |
2 | loxAfr1-417 | Loxodonta africana | hsa-miR-20a | 21/23 | scaffold_8997 | + | 15-36 | N/A | 0.998373 | Ortholog | 24/42 | 2/98 |
3 | loxAfr1-417 | Loxodonta africana | xla-miR-20 | 23/23 | scaffold_8997 | + | 14-36 | N/A | 0.997389 | Ortholog | 24/42 | 2/98 |
4 | loxAfr1-12 | Loxodonta africana | ssc-miR-20 | 22/22 | scaffold_103976 | - | 19-40 | N/A | 0.995706 | Ortholog | 24/42 | 2/98 |
5 | loxAfr1-417 | Loxodonta africana | ssc-miR-20 | 20/22 | scaffold_8997 | + | 15-35 | N/A | 0.999004 | Ortholog | 24/42 | 2/98 |
6 | loxAfr1-417 | Loxodonta africana | rno-miR-20b-5p | 21/21 | scaffold_8997 | + | 13-33 | N/A | 0.997572 | Ortholog | 24/42 | 2/98 |
7 | loxAfr1-12 | Loxodonta africana | oan-miR-20a | 20/20 | scaffold_103976 | - | 17-36 | N/A | 0.992909 | Ortholog | 24/42 | 2/98 |
8 | loxAfr1-12 | Loxodonta africana | hsa-miR-20a* | 21/22 | scaffold_103976 | - | 49-70 | N/A | 0.990193 | Ortholog | 24/42 | 2/98 |
9 | loxAfr1-12 | Loxodonta africana | xtr-miR-20a* | 20/21 | scaffold_103976 | - | 50-70 | N/A | 0.992653 | Ortholog | 24/42 | 2/98 |
10 | loxAfr1-12 | Loxodonta africana | oan-miR-20a-2* | 22/23 | scaffold_103976 | - | 49-71 | N/A | 0.993956 | Ortholog | 24/42 | 2/98 |
Total | 10 record(s). |