- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | loxAfr1-88 | Loxodonta africana | hsa-miR-218 | 21/21 | scaffold_17942 | - | 10-30 | N/A | 0.998162 | Ortholog | 22/40 | 3/82 |
2 | loxAfr1-127 | Loxodonta africana | hsa-miR-218 | 21/21 | scaffold_21685 | - | 9-29 | N/A | 0.999525 | Ortholog | 22/40 | 3/82 |
3 | loxAfr1-88 | Loxodonta africana | dre-miR-218a | 22/22 | scaffold_17942 | - | 10-31 | N/A | 0.997806 | Ortholog | 22/40 | 3/82 |
4 | loxAfr1-127 | Loxodonta africana | dre-miR-218a | 22/22 | scaffold_21685 | - | 10-31 | N/A | 0.999668 | Ortholog | 22/40 | 3/82 |
5 | loxAfr1-127 | Loxodonta africana | hsa-miR-218-2* | 22/22 | scaffold_21685 | - | 49-70 | N/A | 0.930145 | Ortholog | 22/40 | 3/82 |
6 | loxAfr1-88 | Loxodonta africana | mmu-miR-218-1* | 22/22 | scaffold_17942 | - | 49-70 | N/A | 0.994858 | Ortholog | 22/40 | 3/82 |
7 | loxAfr1-127 | Loxodonta africana | mmu-miR-218-1* | 20/22 | scaffold_21685 | - | 50-70 | N/A | 0.998785 | Ortholog | 22/40 | 3/82 |
8 | loxAfr1-18 | Loxodonta africana | oan-miR-218* | 19/20 | scaffold_1087 | - | 31-49 | N/A | 0.873912 | Ortholog | 22/40 | 3/82 |
9 | loxAfr1-127 | Loxodonta africana | oan-miR-218* | 19/20 | scaffold_21685 | - | 50-68 | N/A | 0.999652 | Ortholog | 22/40 | 3/82 |
Total | 9 record(s). |