- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Species | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | fr2-68 | Fugu rubripes | fru-miR-22a | 21/22 | chrUn | + | 51-71 | 142268068-142268145 | 0.963074 | Paralog | 23/37 | 5/51 |
2 | fr2-194 | Fugu rubripes | bta-miR-22-5p | 21/22 | chrUn | - | 13-34 | 35580350-35580433 | 0.999955 | Paralog | 23/37 | 5/51 |
3 | fr2-68 | Fugu rubripes | bta-miR-22-5p | 21/22 | chrUn | + | 11-32 | 142268067-142268146 | 0.999651 | Paralog | 23/37 | 5/51 |
4 | fr2-68 | Fugu rubripes | mdo-miR-22 | 21/22 | chrUn | + | 51-72 | 142268068-142268145 | 0.910871 | Paralog | 23/37 | 5/51 |
5 | fr2-194 | Fugu rubripes | mdo-miR-22 | 20/22 | chrUn | - | 49-69 | 35580354-35580428 | 0.998376 | Paralog | 23/37 | 5/51 |
6 | fr2-229 | Fugu rubripes | mdo-miR-22 | 20/22 | chrUn | - | 47-67 | 113313181-113313251 | 0.934053 | Paralog | 23/37 | 5/51 |
7 | fr2-229 | Fugu rubripes | bfl-miR-22 | 21/22 | chrUn | - | 47-68 | 113313181-113313251 | 0.944733 | Paralog | 23/37 | 5/51 |
8 | fr2-194 | Fugu rubripes | bfl-miR-22 | 20/22 | chrUn | - | 49-70 | 35580354-35580428 | 0.99933 | Paralog | 23/37 | 5/51 |
9 | fr2-194 | Fugu rubripes | xtr-miR-22* | 20/21 | chrUn | - | 12-32 | 35580351-35580432 | 0.999898 | Paralog | 23/37 | 5/51 |
10 | fr2-68 | Fugu rubripes | xtr-miR-22* | 20/21 | chrUn | + | 11-31 | 142268067-142268146 | 0.999497 | Paralog | 23/37 | 5/51 |
11 | fru-mir-22a | Fugu rubripes | fru-miR-22a | 22/22 | scaffold_9 | - | 55-76 | N/A | - | miRBase_13_0 | 23/37 | 5/51 |
12 | fru-mir-22b | Fugu rubripes | fru-miR-22b | 22/22 | scaffold_50 | - | 55-76 | N/A | - | miRBase_13_0 | 23/37 | 5/51 |
Total | 12 record(s). |